| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0249 |
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| Symbol | |
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| ID | 8251334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 292157 |
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| End bp | 293614 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933899 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_003090537 |
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| Protein GI | 255530165 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATT TACAGCTGAC AGATAAGAAA CACGATGAAG CACGACAAGG AGAGGCTTTG
GTTACAGCGG CACCTTTAGT GCGCAATGGC AGGAAGCTGT ATATTGAAAG TTACGGTTGC
CAGATGAATT TTGCGGACAG TGAAATTGTT GCATCGATTT TATTAGACCA GGGATTTGAA
ACTACGGGCG ACTATAAAGA AGCGGATGTG GTGTTCATTA ATACCTGTTC AATCCGGGAA
AACGCAGAAC AAAGGGTACG CAACAGGCTG TCGCAGTTTG GCGCAGAGAA GCGCAGAAAC
CCAAAGCTTA TTGTTGGGGT ACTGGGCTGT ATGGCCGAAC GCCTGAAATC TAAATTTCTG
GAAGAAGAAA AACTGGTGGA TGTGGTGGTT GGCCCTGATG CTTACCGCGA ACTTCCGCAA
TTGCTGAATG AAGTTGAAAG CGGTCATAAG GCCATTAATG TCCTTTTATC ACGTGAGGAA
ACTTATGCAG ACATCAGTCC GGTCCGCTTG AACGGAAATG GCATTACGGC CTTTATTTCA
ATTATGCGGG GTTGCGACAA CATGTGTTCC TTTTGCGTGG TGCCTTTTAC AAGGGGCCGT
GAAAGAAGCC GTGACCCACA CTCTATACTT GCCGAAGCGC AGGACTTATT TGACCGTGGT
TATAAAGAAG TGACTCTGCT GGGACAGAAT GTAGACTCTT ACAAATGGAA GGGTGCCGCT
ACTGATGAAA ACAGGGAAGC GCAGGAAATT GAAGTGAACT TTGCCCAGCT GCTGGAAAAA
GTTGCACTGA TCAGTCCTGA ACTCCGGGTC AGGTTTTCTA CCTCACACCC TAAAGACATT
ACAGACGAGG TGTTATACAC CATTGCCAAA TACGAAAACA TTTGTAACTA TATCCACCTG
CCGGTACAAT CGGGCAGTAC ACGGGTACTG GAACTGATGA ACCGGACTTA TACACGAGAA
TGGTACATCA ACAGGATAGA TGCCATCAGA CAGATTATAC CTGATTGTGC CATTTCTTCG
GATATCATTG CCGGATTCTG TACGGAAACA GAAGAAGAAC ACCAGGAAAC ACTCAGTATC
ATGGACTATG TGGGCTATGA TTTTGCCTTT ACTTTCAGCT ATTCGGAAAG ACCAGGAACA
CTGGCCGCCA GAAAACTGGA GGACGATGTT CCTGAAGAAG TAAAAAAACG CAGGCTGGCA
GAAATTTTAG CTAAACAACA GGAAACTTCT TTGTTCCGTT TGCAACAATT TGTTGGAAAA
ACTGTTAAGA TTTTGGTAGA AGGTACCTCT AAAAAATCTG ACAGGGATTT CTGTGGCAGA
AATGATCAGA ATGCAATGGT TGTTTTCCCT GCTACTGCAG GAATTAAAGC CGGGCAATAT
GTAAATGTGC ATATTGACCG TTGTACCTCT GCAACACTTC TTGGAACTGT AGTGGTACAA
GAAGAGGCAG CAGTTTAA
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| Protein sequence | MIDLQLTDKK HDEARQGEAL VTAAPLVRNG RKLYIESYGC QMNFADSEIV ASILLDQGFE
TTGDYKEADV VFINTCSIRE NAEQRVRNRL SQFGAEKRRN PKLIVGVLGC MAERLKSKFL
EEEKLVDVVV GPDAYRELPQ LLNEVESGHK AINVLLSREE TYADISPVRL NGNGITAFIS
IMRGCDNMCS FCVVPFTRGR ERSRDPHSIL AEAQDLFDRG YKEVTLLGQN VDSYKWKGAA
TDENREAQEI EVNFAQLLEK VALISPELRV RFSTSHPKDI TDEVLYTIAK YENICNYIHL
PVQSGSTRVL ELMNRTYTRE WYINRIDAIR QIIPDCAISS DIIAGFCTET EEEHQETLSI
MDYVGYDFAF TFSYSERPGT LAARKLEDDV PEEVKKRRLA EILAKQQETS LFRLQQFVGK
TVKILVEGTS KKSDRDFCGR NDQNAMVVFP ATAGIKAGQY VNVHIDRCTS ATLLGTVVVQ
EEAAV
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