Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0238 |
Symbol | |
ID | 8251323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 275986 |
End bp | 277332 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644933888 |
Product | protein of unknown function DUF58 |
Protein accession | YP_003090526 |
Protein GI | 255530154 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGAAACC TTTTAAAAAA ATACTATACA GACCTGTTTC TGAGCAAAAG ATTTTTTGCC GGCATTGGCC TGTGCGTAAG CCTGTTCCTG TTTTCGTTTT TTCTGCCCTG GCTGGCTGAT CTGGCCTACC TGTGTTTTTG GATATTTGCA GCACTGGTAC TGGTAGATGG CCTGCTGCTG TACCAGCCTA AAAAGACGGT GTTTGTGCGG AGGGACCTTC CGGAAAGGTT AAGCAACGGG GATGACAATG AGCTGCACAT TTATCTGGAG AATTTCTATG CTTTTGGTAT CCGGGCCGGA CTTATTGACG AAATCCCTTA TCAGTTCCAA AAAAGGGATC TGTGGTTTAA AAGCTATCTT AAATCGGGTA CACAGAAAAC CATCACCTAT ACTTTAAGAC CAACAAAAAG GGGTGAGTAT ATTTTTGGGC AGCTAAGGCT GTATGTTCAA TCGCCTGTTG GCCTTGTGGT ACGCAGGTTC AATATCGGAT CGGAAGTTAC CGTTCCGGTT TATCCTTCTT TTTTACAGCT GCGCAAATAC GAACTGATGG CTATATCGCA CCGGTTAAAT GAAATTGGGA TCAAAAAGAT CAGGCGTATA GGGCATAGCA TGGAATTTGA CCAGGTAAAG AATTATGTGC AGGGCGACGA TTACCGTACA GTGAACTGGA AGGCAACAGC CAGGAAGGGC GAGCTGATGG TGAACACTTT TACCGATGAA AAATCGCAGC ATGTATATTG TATCATCGAT AAATCGAGAT CCATGAAAAT GCCTTTTGAA GGATTGAGCC TGCTGGATTA TGCGATTAAT GCAAGCCTTA TCCTTTCCAA TGTGGCCCTG GTAAAGGAAG ACAAGGCAGG CCTGATCACG ATAGCTGAAA AAACAGGAAG TGTGGTACCT GCAGATCGCA GACCGGCGCA GCTTGGTAAA ATAATGGCTA TTTTATACAA AGAAAAAACG CGGTACCTGG AAATGAATAT GGAAGCGTTA TATACCACGG TGCGCAGCGT ATTGAAGCAG CGTAGCCTGG TTGTTTTTTT TACCAATTTC GAAAGTATGT CTGCCTTAAA CCGGCAGCTT CCCTATTTAA AGCGTGTGGC AAAATTTCAC CTGCTGCTCA TTGTGTTTTT TGAAAATACA GAACTTAAAA CCTTAACAGA AAAACCTGTG CAGGATGTAG AGGACATATA CATTCAAACT ATAGCAGCTA AATTTGCTTA CGAAAAAAAG CTGATGGTTA AGGAACTGGC CAAACATGGG ATACTGAGTA TCCTTACCCC GCCCGAAAAA TTAACCATAA ATGTAGTGAA CCGTTACCTG TCTATTAAGG CGCAGCAAAA AATCTAG
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Protein sequence | MRNLLKKYYT DLFLSKRFFA GIGLCVSLFL FSFFLPWLAD LAYLCFWIFA ALVLVDGLLL YQPKKTVFVR RDLPERLSNG DDNELHIYLE NFYAFGIRAG LIDEIPYQFQ KRDLWFKSYL KSGTQKTITY TLRPTKRGEY IFGQLRLYVQ SPVGLVVRRF NIGSEVTVPV YPSFLQLRKY ELMAISHRLN EIGIKKIRRI GHSMEFDQVK NYVQGDDYRT VNWKATARKG ELMVNTFTDE KSQHVYCIID KSRSMKMPFE GLSLLDYAIN ASLILSNVAL VKEDKAGLIT IAEKTGSVVP ADRRPAQLGK IMAILYKEKT RYLEMNMEAL YTTVRSVLKQ RSLVVFFTNF ESMSALNRQL PYLKRVAKFH LLLIVFFENT ELKTLTEKPV QDVEDIYIQT IAAKFAYEKK LMVKELAKHG ILSILTPPEK LTINVVNRYL SIKAQQKI
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