Gene Phep_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0238 
Symbol 
ID8251323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp275986 
End bp277332 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content43% 
IMG OID644933888 
Productprotein of unknown function DUF58 
Protein accessionYP_003090526 
Protein GI255530154 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAAACC TTTTAAAAAA ATACTATACA GACCTGTTTC TGAGCAAAAG ATTTTTTGCC 
GGCATTGGCC TGTGCGTAAG CCTGTTCCTG TTTTCGTTTT TTCTGCCCTG GCTGGCTGAT
CTGGCCTACC TGTGTTTTTG GATATTTGCA GCACTGGTAC TGGTAGATGG CCTGCTGCTG
TACCAGCCTA AAAAGACGGT GTTTGTGCGG AGGGACCTTC CGGAAAGGTT AAGCAACGGG
GATGACAATG AGCTGCACAT TTATCTGGAG AATTTCTATG CTTTTGGTAT CCGGGCCGGA
CTTATTGACG AAATCCCTTA TCAGTTCCAA AAAAGGGATC TGTGGTTTAA AAGCTATCTT
AAATCGGGTA CACAGAAAAC CATCACCTAT ACTTTAAGAC CAACAAAAAG GGGTGAGTAT
ATTTTTGGGC AGCTAAGGCT GTATGTTCAA TCGCCTGTTG GCCTTGTGGT ACGCAGGTTC
AATATCGGAT CGGAAGTTAC CGTTCCGGTT TATCCTTCTT TTTTACAGCT GCGCAAATAC
GAACTGATGG CTATATCGCA CCGGTTAAAT GAAATTGGGA TCAAAAAGAT CAGGCGTATA
GGGCATAGCA TGGAATTTGA CCAGGTAAAG AATTATGTGC AGGGCGACGA TTACCGTACA
GTGAACTGGA AGGCAACAGC CAGGAAGGGC GAGCTGATGG TGAACACTTT TACCGATGAA
AAATCGCAGC ATGTATATTG TATCATCGAT AAATCGAGAT CCATGAAAAT GCCTTTTGAA
GGATTGAGCC TGCTGGATTA TGCGATTAAT GCAAGCCTTA TCCTTTCCAA TGTGGCCCTG
GTAAAGGAAG ACAAGGCAGG CCTGATCACG ATAGCTGAAA AAACAGGAAG TGTGGTACCT
GCAGATCGCA GACCGGCGCA GCTTGGTAAA ATAATGGCTA TTTTATACAA AGAAAAAACG
CGGTACCTGG AAATGAATAT GGAAGCGTTA TATACCACGG TGCGCAGCGT ATTGAAGCAG
CGTAGCCTGG TTGTTTTTTT TACCAATTTC GAAAGTATGT CTGCCTTAAA CCGGCAGCTT
CCCTATTTAA AGCGTGTGGC AAAATTTCAC CTGCTGCTCA TTGTGTTTTT TGAAAATACA
GAACTTAAAA CCTTAACAGA AAAACCTGTG CAGGATGTAG AGGACATATA CATTCAAACT
ATAGCAGCTA AATTTGCTTA CGAAAAAAAG CTGATGGTTA AGGAACTGGC CAAACATGGG
ATACTGAGTA TCCTTACCCC GCCCGAAAAA TTAACCATAA ATGTAGTGAA CCGTTACCTG
TCTATTAAGG CGCAGCAAAA AATCTAG
 
Protein sequence
MRNLLKKYYT DLFLSKRFFA GIGLCVSLFL FSFFLPWLAD LAYLCFWIFA ALVLVDGLLL 
YQPKKTVFVR RDLPERLSNG DDNELHIYLE NFYAFGIRAG LIDEIPYQFQ KRDLWFKSYL
KSGTQKTITY TLRPTKRGEY IFGQLRLYVQ SPVGLVVRRF NIGSEVTVPV YPSFLQLRKY
ELMAISHRLN EIGIKKIRRI GHSMEFDQVK NYVQGDDYRT VNWKATARKG ELMVNTFTDE
KSQHVYCIID KSRSMKMPFE GLSLLDYAIN ASLILSNVAL VKEDKAGLIT IAEKTGSVVP
ADRRPAQLGK IMAILYKEKT RYLEMNMEAL YTTVRSVLKQ RSLVVFFTNF ESMSALNRQL
PYLKRVAKFH LLLIVFFENT ELKTLTEKPV QDVEDIYIQT IAAKFAYEKK LMVKELAKHG
ILSILTPPEK LTINVVNRYL SIKAQQKI