Gene Phep_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0236 
Symbol 
ID8251321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp273811 
End bp274992 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content43% 
IMG OID644933886 
Producthypothetical protein 
Protein accessionYP_003090524 
Protein GI255530152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAT TAAAGTTATA TCTGATTGGC GGTGCTCTGG CAATGGTATT GTACCTGCTT 
GCACAATATT ATAAGCCTAA GCCAACAGAC TGGACCCCCA GCTATTTAAA AGAAGATAAA
ATCCCCTTTG GTCTTTATAT TTTGTTTCAT GAAGTGGAAC GGTTGTTCCC TGATACGAAA
GTAAAGACCA CAAGATTGCC GGCCTATAAT ACATTAAAAG GGAAGCATTT TAAAAATACG
GCCTACCTGT TTATCGCTGG CGAGGTAAAA TTTACCAGTT ACGATTACCG GGAACTTGTG
CAGTACATGA AGGATGGGAA TGACGTATTT ATTGCTGCTT TTAATTTAAA CAGGGCATTG
AGCGACAGGC TGAAGATCAG GATCAGCTCT TCATTGAATT ATACCAAAGA AAAAAGCACC
CCGGTAAATT TTGTAAACCC TGTACTGAAA GGTCATCCAG ACTATGTGTT TGATAAAGGC
CTGGGCGACC AGTATTTTAG CAAAATAGAT ACCTTGAAAG CTACTGTACT GGGAAGGAAT
GCCAGGGGGG AGGTTAATTT TGTAAAATAT ACCTTTGGTA AAGGTGGACT CTATTTATTG
CCGAACCCGC AACTGCTGAG CAATTACAAT TTGCTGAACC TGCGGGGCGC GGAATATGCG
GCCAGGGCAT TGTCTTACCT GCCTGCTCCG GAAACCCTGA TCTGGGATGA GAACAATACC
CGCGGCAGTA CCGATGATAG TGATATCCTA CGTGTACTGT TTAAACACAC TCCTTTGCGC
TGGGCGTATT ACCTGGCCTT AACAGGTTTG CTGGTATTTG TTTTTTTTGA AATGAAACGC
AGGCAACGCA TCATCCCGAT AGTAAGCCCT TTAAAGAACA GCTCGGTCGA CTTTGTCCGC
GTGGTGGGCA AGGTATATTA CCAGCAGCGT GACAACAGGG ACATTGCCCG TAAAAAGATC
AGCTATTTCC TGGAACACAT CAGGGCAGCT TACCGGTTAA AAACAACGGT GCTAGATAAA
GAATTTGTAA ATGCATTGGC GGTTAAATCG GGGCTTACTG AAATTGCCGT TCAGGAGCTG
TTTATCCTTA TTAAAAGCCT TGAAAATGCC CCTATGGTGA ATGATCAGCA GCTCATTGAG
CTCAACAAAT CAATAGAAAA ATTTTATAAA CAAGCCCAAT AA
 
Protein sequence
MKGLKLYLIG GALAMVLYLL AQYYKPKPTD WTPSYLKEDK IPFGLYILFH EVERLFPDTK 
VKTTRLPAYN TLKGKHFKNT AYLFIAGEVK FTSYDYRELV QYMKDGNDVF IAAFNLNRAL
SDRLKIRISS SLNYTKEKST PVNFVNPVLK GHPDYVFDKG LGDQYFSKID TLKATVLGRN
ARGEVNFVKY TFGKGGLYLL PNPQLLSNYN LLNLRGAEYA ARALSYLPAP ETLIWDENNT
RGSTDDSDIL RVLFKHTPLR WAYYLALTGL LVFVFFEMKR RQRIIPIVSP LKNSSVDFVR
VVGKVYYQQR DNRDIARKKI SYFLEHIRAA YRLKTTVLDK EFVNALAVKS GLTEIAVQEL
FILIKSLENA PMVNDQQLIE LNKSIEKFYK QAQ