Gene Phep_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0235 
Symbol 
ID8251320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp273089 
End bp273814 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID644933885 
Producthypothetical protein 
Protein accessionYP_003090523 
Protein GI255530151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGG CGCTTGTTGT ACTTTTACTT TGCTGTTTAA CTTTGCCGGT CTTTGCCAGT 
GTTCCGGCTG CAAAAGATCC GGTACAGCCT GCAAGGCTTA TAAACGACAG CACCAACTTA
AAGGTTAGGC GCTTTGACCT GCAGCAGATG GATGCCTACA GGGCACAAAA AGCCTTCAGG
TACGATGATG TTGCGCCGTT ACATGAAGGG TTGTGGGAAA AGTTCTGGAG ATGGGTGTGG
CGACAGATCA ACGACCTGAT CAGTAATAAA TATTCGGGTG GGTTTTTAAA ATACCTGCTC
ATTGCTGGAG TGGTGGCCAT CTTTGTTTTT GTAATTGTAA AAATGCTGGG GCTCGACCTC
AGGATATTTG CCGGTAAACC TAAAGTTGTT GAAGTGCCTT ATACGGAATC GGCCGATAAC
ATTCATGAGA TCAATTTTAA TGAAGAAATA GAAAGGGCAA TTGCGGCTGC CAATTACCGG
CTGGCAGTGC GCCTGTTTTA CCTGTATTCT TTAAAACGGC TGGATGAAAG TGCACTGATC
AGCTGGCTGC CTGAAAAAAC AAACCAAACC TATATTGCTG AACTTGCCGA CCCCGAAAAA
AGGCAACAAT TTAGCCGGCT TACCACGCAG TTTGAATACA TCTGGTACGG AGAGTTTTTT
ATAGATAAGG AAACCTTTGG CTATGTTAAA GGAGATTTTG ACCGGTTTAA TGGTAAGGGC
ACATGA
 
Protein sequence
MRKALVVLLL CCLTLPVFAS VPAAKDPVQP ARLINDSTNL KVRRFDLQQM DAYRAQKAFR 
YDDVAPLHEG LWEKFWRWVW RQINDLISNK YSGGFLKYLL IAGVVAIFVF VIVKMLGLDL
RIFAGKPKVV EVPYTESADN IHEINFNEEI ERAIAAANYR LAVRLFYLYS LKRLDESALI
SWLPEKTNQT YIAELADPEK RQQFSRLTTQ FEYIWYGEFF IDKETFGYVK GDFDRFNGKG
T