| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0232 |
|---|
| Symbol | |
|---|
| ID | 8251317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 270414 |
|---|
| End bp | 271157 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644933882 |
|---|
| Product | RDD domain containing protein |
|---|
| Protein accession | YP_003090520 |
|---|
| Protein GI | 255530148 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1714] Predicted membrane protein/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCA TTAAAGTAAA TACCAGCCAG CATGTCGATA TCGATTACCC CGTTGCCGGT
TTAGGAGAAA GAATAGCCGC AGCGCTGATA GATTTGGGCC TGTTTATTGG TTTATATCTG
ATATTTGTAC TGCTTGCACT TGTTGGTGGT CTTTCTGGTG TCATAGGCGG TTCACCATAT
ATATTTTTTA TACTGATTGG CATTTACTTC GGTGCTTATG TATTTTACGA CCTGATCTGC
GAGATCTTTA TGAACGGACA AAGCATCGGA AAGAGGCTGA TGAAAATTAA AGTGATCAGT
CTGGATGGCA GTCAGGCCAG TATAGGCCAG TACTTTATCC GCTGGTTGTT CAGACTGGTC
GATTTTACCC TTACCGCACA AATGGCCGGC TTAATCTGTA TTGCAGTATC GCAGAACAAA
CAAAGAATAG GAGATATGGT AGCAGGTACT ACAGTCATCA AAACTGTGCC GCACACAAAC
TTTAACCACA TTGCCTTCCA TCCTGTTGAA GAAGAATATA CACCGGTGTT CAACAACACC
AGCCAGCTGA ACGACAGGGA CGTTGAACTG ATCCATGAGG TCATAGACAC CTATTACAAA
ACCTTTAATG CCGATCTGAT CTACGCCATG TCGGCAAAAG TAGCATCGCT TCTGTCGGTA
GAACGTCCTG AAGGTATGAA TGAAATGACT TTCTTAAAAA CGGTGGTTAA AGATTACAAC
TATCAAACCT CATTGGTACA ATAG
|
|---|
| Protein sequence | MDTIKVNTSQ HVDIDYPVAG LGERIAAALI DLGLFIGLYL IFVLLALVGG LSGVIGGSPY
IFFILIGIYF GAYVFYDLIC EIFMNGQSIG KRLMKIKVIS LDGSQASIGQ YFIRWLFRLV
DFTLTAQMAG LICIAVSQNK QRIGDMVAGT TVIKTVPHTN FNHIAFHPVE EEYTPVFNNT
SQLNDRDVEL IHEVIDTYYK TFNADLIYAM SAKVASLLSV ERPEGMNEMT FLKTVVKDYN
YQTSLVQ
|
|---|
| |