Gene Phep_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0228 
Symbol 
ID8251313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp268116 
End bp268757 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content40% 
IMG OID644933878 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_003090516 
Protein GI255530144 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.988165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTAG TTTTTAATAA AAATATTGAC GAGGATACCA TACTTGCTGT ATGGAAAATT 
GAGGAAAGTG AAGAACAGCT GCGATCGGGC TTACAACTGA AACAGCATGA GCTGGATTTT
ATTTCTTCAT TAAATAATGG CAAACGCCTG TTGCACTGGT TAAGTACGCG TGTGTTGTTA
AGGACAATGC TCAATACCGC AGAATATATT GACTGCAGGA TGGACGACCA CGGTAAGCCT
TATTTGCCCG ATTTTAATTA TCATATTTCT TTAAGTCATT CTTACGATTA TGCGGCGGTA
ATTATCGGCA AGACCAAAAA GGTTGGTGTA GATATTGAGC TGATCAAACA TAAGATCAGG
AGTATCAGGC ATAAATTCCT GTCCGATGTG GAACTTGCAC AAAAACAGAT CGGGGACAAT
ATCAATGGTT TATATGTTTG CTGGTGCGCC AAGGAAGCCA TTTATAAGTG GAACGGCAGG
AGAGGCCTGG AGTTTAAGCA GGACATCCAT ATTAAACCAT TCAGGTTAAA AAATGAGGGG
AAATTAAATG CGCTGGTTGA TTTACCGGAA GGCAGTGCCG AACTTACGGT TCATTATTTA
AAAATGGGTG ATGGGTATAT GCTGGGCTAT GTAGTAGCGT AA
 
Protein sequence
MPVVFNKNID EDTILAVWKI EESEEQLRSG LQLKQHELDF ISSLNNGKRL LHWLSTRVLL 
RTMLNTAEYI DCRMDDHGKP YLPDFNYHIS LSHSYDYAAV IIGKTKKVGV DIELIKHKIR
SIRHKFLSDV ELAQKQIGDN INGLYVCWCA KEAIYKWNGR RGLEFKQDIH IKPFRLKNEG
KLNALVDLPE GSAELTVHYL KMGDGYMLGY VVA