| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0224 |
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| Symbol | |
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| ID | 8251309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 263088 |
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| End bp | 263963 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644933874 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003090512 |
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| Protein GI | 255530140 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACG AACCGATGTT AAGAGATGAT GCCTTAAAAG GTAAAACCAT AGTGATCACG
GGCGGCGGCA CAGGCCTAGG CAGGGCCATG GGCACTTATT TCCTGAAACT GGGGGCCAAC
CTGGTCATCA CCAGCCGCAA ACAGGAAGTG CTGCAAAAAA CAGCTGCAGA AATGGAACAG
GAAACCGGGG GCAAAGTGCT GGCGGTAGCC TGTGATGTAC GCGATTACGA CCAGGTAGAA
AACGTGCTGT CAGAAACACT TAAAACTTTT GGCAGTGTAA ACAGCCTTTT AAATAATGCA
GCCGGCAACT TCATTTCCCC TACAGAACGG CTATCGGCAA ATGCCTTTTC CAGCATCATC
GATATTGTAC TTAAAGGTTC TGTAAACTGT ACCCTTGCTT TTGGCAAACA TTGGATAAAA
GAGAAACAAG CCGCAAGTGT ACTGAATATT GTAACCACTT ATGCCTTTAC CGGATCGGCT
TACGTAGTGC CTTCGGCCTG TGCAAAAGGG GGCGTACTGG CCATGACCCG TTCGCTGGCT
GTTGAATGGG GTAAATATGG CATCCGTACC AATGCCATAG CACCAGGCCC CTTCCCTACA
AAAGGTGCCT GGGAGCGTTT ACTGCCCGGC GATCTGGCCA AAAAGTTTGA TTTCAAAAAC
CGGGTGCCCC TGAAACGGGT TGGTGAACAC CAGGAACTGG CCAACCTTGC TGCCTTTCTG
ATCAGCGACT TTGCCGGCTA TATCAATGGT GAAGTGATCA GCATAGACGG AGGCGAATGG
CTGCAGGGCG CGGGTCAGTT TAATGGTCTG GAGGCAGTAC CCAATGAAAT GTGGGACGCT
TTTGAACAAA TGACACGATC GGCTAAAGGG AGCTGA
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| Protein sequence | MFNEPMLRDD ALKGKTIVIT GGGTGLGRAM GTYFLKLGAN LVITSRKQEV LQKTAAEMEQ
ETGGKVLAVA CDVRDYDQVE NVLSETLKTF GSVNSLLNNA AGNFISPTER LSANAFSSII
DIVLKGSVNC TLAFGKHWIK EKQAASVLNI VTTYAFTGSA YVVPSACAKG GVLAMTRSLA
VEWGKYGIRT NAIAPGPFPT KGAWERLLPG DLAKKFDFKN RVPLKRVGEH QELANLAAFL
ISDFAGYING EVISIDGGEW LQGAGQFNGL EAVPNEMWDA FEQMTRSAKG S
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