Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0223 |
Symbol | |
ID | 8251308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 262038 |
End bp | 263084 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644933873 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase III |
Protein accession | YP_003090511 |
Protein GI | 255530139 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.583463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGTT CAAAGATTGC GGGGATAGGT TATTATGTAC CCAAAAATGT TTATACCAAT AAAGATCTAT CGCGTTTTAT GGATACCAGT GATGAATGGA TACAGGAACG CACCGGAATC AAAGAACGCA GGTTTGCCGA CCGGCTGGAA GAGACGACCA CGACCATGGG CGTGGAAGCA GCCAAAATTG CGATTGATAG GGCAGGTATT ACAGCTCAGG ATATCGATTT TATCCTGTTT GCCACGCTTA CTCCAGATTA TTATTTTCCG GGATGCGGCG TATTGCTGCA GCGGGAAATG AAAATGAAAG AAGTTGGGGC GCTGGATATC CGGAACCAAT GTTCGGGCTT TCTGTATGCG CTTTCTGTTG CCGATCAGTT CATTAAAACG GGTATGTACA AAAACATATT GGTGGTAGGC AGCGAAAAGC ATTCTTTTGC GATGGATTTT GAAACACGCA GTCGTAATGT GTCAGTCATA TTTGGAGATG GCGCAGGTGC AGTGGTTTTG CAGCCCACAC AAGAAGAAGG ACAGGGTATT TTGAGTACAC ATTTGCATAG TGATGGTGCA GATGCAGAAC TGCTGGCCAT GTTTTATCCG GGGGCGAGCG CCAATAAATG GCTGAAGGAT AAACCCGGTT ATCCGGATCA GGAGCTTGGG GGACTTTTTT TAACCAGGGA ACAATTGGAA GGCGGTGCCG CACTGCCTTA TATGGACGGG CCGGCGGTAT TTAAAAAAGC CGTGGTCAAA TTTCCGGAAG TGATCAATGA AGCATTAACT GCCAATCATT TAACAGCGGG AGATATTGAC CTGCTGGTTC CGCATCAGGC TAATTTACGC ATCAGTCAAT ATGTACAGCA GTTATTGGGA CTGCCGGATG ATAAGGTTTT CAATAACATC CAGAAGTATG GCAATACTAC CGCGGCATCG GTTCCTATTG CTTTATGTGA AGCCTGGGAA GCCGGAAAAA TTAAAGATGG CGACCTGGTT TGTCTGGCTG CATTTGGTTC TGGCTTTACC TGGGCCAGTG CTTTGATCAG GTGGTGA
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Protein sequence | MQRSKIAGIG YYVPKNVYTN KDLSRFMDTS DEWIQERTGI KERRFADRLE ETTTTMGVEA AKIAIDRAGI TAQDIDFILF ATLTPDYYFP GCGVLLQREM KMKEVGALDI RNQCSGFLYA LSVADQFIKT GMYKNILVVG SEKHSFAMDF ETRSRNVSVI FGDGAGAVVL QPTQEEGQGI LSTHLHSDGA DAELLAMFYP GASANKWLKD KPGYPDQELG GLFLTREQLE GGAALPYMDG PAVFKKAVVK FPEVINEALT ANHLTAGDID LLVPHQANLR ISQYVQQLLG LPDDKVFNNI QKYGNTTAAS VPIALCEAWE AGKIKDGDLV CLAAFGSGFT WASALIRW
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