Gene Phep_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0223 
Symbol 
ID8251308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp262038 
End bp263084 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content47% 
IMG OID644933873 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_003090511 
Protein GI255530139 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.583463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGTT CAAAGATTGC GGGGATAGGT TATTATGTAC CCAAAAATGT TTATACCAAT 
AAAGATCTAT CGCGTTTTAT GGATACCAGT GATGAATGGA TACAGGAACG CACCGGAATC
AAAGAACGCA GGTTTGCCGA CCGGCTGGAA GAGACGACCA CGACCATGGG CGTGGAAGCA
GCCAAAATTG CGATTGATAG GGCAGGTATT ACAGCTCAGG ATATCGATTT TATCCTGTTT
GCCACGCTTA CTCCAGATTA TTATTTTCCG GGATGCGGCG TATTGCTGCA GCGGGAAATG
AAAATGAAAG AAGTTGGGGC GCTGGATATC CGGAACCAAT GTTCGGGCTT TCTGTATGCG
CTTTCTGTTG CCGATCAGTT CATTAAAACG GGTATGTACA AAAACATATT GGTGGTAGGC
AGCGAAAAGC ATTCTTTTGC GATGGATTTT GAAACACGCA GTCGTAATGT GTCAGTCATA
TTTGGAGATG GCGCAGGTGC AGTGGTTTTG CAGCCCACAC AAGAAGAAGG ACAGGGTATT
TTGAGTACAC ATTTGCATAG TGATGGTGCA GATGCAGAAC TGCTGGCCAT GTTTTATCCG
GGGGCGAGCG CCAATAAATG GCTGAAGGAT AAACCCGGTT ATCCGGATCA GGAGCTTGGG
GGACTTTTTT TAACCAGGGA ACAATTGGAA GGCGGTGCCG CACTGCCTTA TATGGACGGG
CCGGCGGTAT TTAAAAAAGC CGTGGTCAAA TTTCCGGAAG TGATCAATGA AGCATTAACT
GCCAATCATT TAACAGCGGG AGATATTGAC CTGCTGGTTC CGCATCAGGC TAATTTACGC
ATCAGTCAAT ATGTACAGCA GTTATTGGGA CTGCCGGATG ATAAGGTTTT CAATAACATC
CAGAAGTATG GCAATACTAC CGCGGCATCG GTTCCTATTG CTTTATGTGA AGCCTGGGAA
GCCGGAAAAA TTAAAGATGG CGACCTGGTT TGTCTGGCTG CATTTGGTTC TGGCTTTACC
TGGGCCAGTG CTTTGATCAG GTGGTGA
 
Protein sequence
MQRSKIAGIG YYVPKNVYTN KDLSRFMDTS DEWIQERTGI KERRFADRLE ETTTTMGVEA 
AKIAIDRAGI TAQDIDFILF ATLTPDYYFP GCGVLLQREM KMKEVGALDI RNQCSGFLYA
LSVADQFIKT GMYKNILVVG SEKHSFAMDF ETRSRNVSVI FGDGAGAVVL QPTQEEGQGI
LSTHLHSDGA DAELLAMFYP GASANKWLKD KPGYPDQELG GLFLTREQLE GGAALPYMDG
PAVFKKAVVK FPEVINEALT ANHLTAGDID LLVPHQANLR ISQYVQQLLG LPDDKVFNNI
QKYGNTTAAS VPIALCEAWE AGKIKDGDLV CLAAFGSGFT WASALIRW