| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0221 |
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| Symbol | |
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| ID | 8251306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 259057 |
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| End bp | 261549 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933871 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003090509 |
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| Protein GI | 255530137 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.280275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATT ACTTTTACAA AGTTCTGCTT TTAACGCTTG CCTTTTGTTC TGCCACCATA
ACCCTTAATG CCCAGTCTGC CAGTGATGGT AAAATAACCG CCAAAGTTGT GGACGCCCAA
ACCGGTGAAA CCATCCCTTT TGCCTCGGCA ATGATCATCA ACCGTAAAAC CAAAGCAGTG
GTAAAGGGCA TGCAGACCGA TGCCAACGGG AACCTGAACA TGACCGCACT GCCTAAAGGC
GCTTTCACAT TTAAGGTAAG CTATGTGGGT TATCAGACCA TGGTAAGAGA TTCTGTTGCC
ATCACCGATG CACACAGGGA AATTAACTTG GGCACCATAA AAATGAAAAC GGCCAAAGGC
ACAGCACTAA AGGAAGTGGC CATTACAGCA CAGAAAAGTA CCATGCAGCT TGGTATTGAT
AAAAAGGTTT TTTCTGTTGA CCAGAGCTTG GTAAGTGAGG GCGGGTCGGC TTCAGACCTA
TTGCAGAACG TACCTTCTGT TCAATCGGAT ATTGATGGAA ATGTGAGCCT CAGGGGTTCA
ACCGGCGTTA AAGTTTTAAT AGATGGCAAA CCTTCCATGA TTGCCGGTGG CAACGTTGCA
CAGATCCTGC AATCTATACC TGCCAGTTCC ATTGAAAGTG TAGAGCTGAT TACCAACCCT
TCCGCAAAAT ACGATGCAGA AGGACAATCG GGCATCATCA ATATCGTTTT AAAGAAAAAT
AAAAAGCTTG GACTAAACGG CTCTGTAGCA CTCACTGCAG GCAACCGCGA CAATTACAAT
GCAAATACCA GTCTCAGCTT TCAGAACAAT AAGGTTAACA TTTATGGCAA CTACAGCTAT
CGTTACGGAA ACCGCCTGGG TGGTGGCTAC AGCAATATCC AGTATTTAAA CCCAAGCTTT
CCCACTGCTT TTGCCAATCA AAGTACCGAT TCAAAATCAT TGGATAAAGG CCATAATTTT
AAGGCCGGGC TGGATTATTA CCTTGCCCCA AAAAGTATCC TCAGCTTTAC CGGCGGGTTT
AACATCCGTG ACAACGACAG GAATGAGTTT TTAAACATCG ATAAATTAAA CGCTTCAAAA
AACCCGCTTG AACTGAGCAG AAGAAACAAT TCCAATTCGG GATCAGGTGG GAGCTACGAC
CTTAGCCTGG ATTTTGTTCA GAAATTTAAG AAACCCAAGG AAGAGCTTAC CTTTAACTTC
AGCTTTTCGG ACGGGACCAA CGACAATTAC CAGAATTACC AGACCGATGT TTACAACATC
AATGGTTCTG ACGTCAATTT GCTGCCCGCT ATCCAGATCA ATGATGGAAA GGGGACAAAC
AGGAGTTATA ACATCCAGAC CGATTATACC CTGCCTGTTG GTAAAGCAGG AAAAATTGAG
GCCGGCTACC GCAGCCAGAT CCGATATGCC GACAACAATA CCTTTTCTAC TAACTTTAAC
CACCTTAACG ATGAATATGA CATCAATTTT GCACTGACCA ACGAATTTAA CAGCAAAGAC
CAGGTGCATG CCCTGTATGT CAATTTCCAG AACCAGGTAA AAAACTTCGG CTACCAGATA
GGTTTAAGGG GCGAAGATGC CACACTCGAC ACCCGTTTGG GCAGGTACGA CAATGCAGGG
AATTTGAGTT ATGTTCCCGG AAAGGTAGCT TATAAAAGGC TGTACCCAAG TATTTTCCTT
ACTCAGAAAT TCAATGCCGA TCAGCAGCTC CAGCTCAGTT ACAGCCGCAG GGTAAACAGG
CCCCGGGGAT GGGATACCAA TCCTTTTCTG GATGTCTCAG ACCCATTGAT CTGGCGCCAG
GGTAATCCCA ACCTGAAACC TGAAGATGTA CATGCTTATG AATTGAGCTA CAGTAAATAC
TGGAAAAAGA TTACCTTTAT TTCTACTGCC TATATGCGCC AGACCAACGA TGTAATCCAA
CGCATACGGA CAGAGGCTGA TGAAAACGGG ATTACCATCG TCACCCCCCG GAACTTAACC
CGGGAATTGT CGAGCGGCCT GGAACTTATT GCCAGGGTTG ATGCTGCCAA AGCCTGGAAC
TTTACCGGAA ACGTAAATCT ATACCAGCGC AAGCTTGATG GCGTACCCCA GTTTGGGATT
GTAGACAACT CTGGTTTTAG CTGGAATGCC AACCTGACCA ATAATTTTAT CCTTCCATAC
AACATCACCA TGCAGGTAAA AGGCGATTAT CGTTCAAGGG AGATCATGGC CCAGGGCAGA
AGAAATGCCA TGTATGCAGT AGATGCAGGA GCACGGTACG ACTTTAAAAA CAAAAAATCC
TCTTTAAGCC TGAATGTAAG GGACGTATTT AACACCCGCC GGTGGAGCAT GACCACGGGT
GCCAACAATG CCATTACCGA TTTCAGGCGC TACATGCAGG GCACCATGGC CAGTTTAACT
TATGCTTACC GTTTTGGTAA AAATGATTTT AACTTTAAAA AGACCAAAAA ATCTGACCAG
CAGGAAATGC GTTCGGATGA AGAGTCCTTT TAG
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| Protein sequence | MTNYFYKVLL LTLAFCSATI TLNAQSASDG KITAKVVDAQ TGETIPFASA MIINRKTKAV
VKGMQTDANG NLNMTALPKG AFTFKVSYVG YQTMVRDSVA ITDAHREINL GTIKMKTAKG
TALKEVAITA QKSTMQLGID KKVFSVDQSL VSEGGSASDL LQNVPSVQSD IDGNVSLRGS
TGVKVLIDGK PSMIAGGNVA QILQSIPASS IESVELITNP SAKYDAEGQS GIINIVLKKN
KKLGLNGSVA LTAGNRDNYN ANTSLSFQNN KVNIYGNYSY RYGNRLGGGY SNIQYLNPSF
PTAFANQSTD SKSLDKGHNF KAGLDYYLAP KSILSFTGGF NIRDNDRNEF LNIDKLNASK
NPLELSRRNN SNSGSGGSYD LSLDFVQKFK KPKEELTFNF SFSDGTNDNY QNYQTDVYNI
NGSDVNLLPA IQINDGKGTN RSYNIQTDYT LPVGKAGKIE AGYRSQIRYA DNNTFSTNFN
HLNDEYDINF ALTNEFNSKD QVHALYVNFQ NQVKNFGYQI GLRGEDATLD TRLGRYDNAG
NLSYVPGKVA YKRLYPSIFL TQKFNADQQL QLSYSRRVNR PRGWDTNPFL DVSDPLIWRQ
GNPNLKPEDV HAYELSYSKY WKKITFISTA YMRQTNDVIQ RIRTEADENG ITIVTPRNLT
RELSSGLELI ARVDAAKAWN FTGNVNLYQR KLDGVPQFGI VDNSGFSWNA NLTNNFILPY
NITMQVKGDY RSREIMAQGR RNAMYAVDAG ARYDFKNKKS SLSLNVRDVF NTRRWSMTTG
ANNAITDFRR YMQGTMASLT YAYRFGKNDF NFKKTKKSDQ QEMRSDEESF
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