| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0217 |
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| Symbol | |
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| ID | 8251302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 254523 |
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| End bp | 255275 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644933867 |
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| Product | LytTr DNA-binding region |
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| Protein accession | YP_003090505 |
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| Protein GI | 255530133 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.630653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAAGT TAAAGTGTAT TGCAGTTGAT GACGAGCCTT TGGCATTAGA CATTATAGAA
GACTACGTTT CTAAAGTGCC TTTTCTGGAG CTGATCAAAC GCACGGAAAA TGCGATAGAG
GCCTTACAGA TGGTGCAGGC AGGTGGGGTT GACCTGGTGT TTCTGGATAT ACAGATGCCG
GAGCTGACAG GGATCCAGTT TTTGAAGATC GCAAATGGCA AGTCCAATTA TATTTTTACA
ACGGCTTATT CCCAGTATGC CCTGGAAAGC TACGACCTGA ATGTTTCTGA TTATCTGTTG
AAGCCCATTG CATTCGACCG TTTTTATAAG GCGGTAGAGA AAGTGCACAA CCAGCTGAAG
GTAGGACAAC CAGCTGAAAA CGCTATTCAG CCACTTTTAA CACCTGCAAC GGCAGTGGCC
CCTGCCAATC CCATACAGGA TTTTATTTTT GTAAAAACGG AGCATAAAAT CCAAAAGATT
GAGCTGGACA ATATCCTGTA CATAGAAGGG TTGAAAGATT ACATTTCTAT TTTTACTAAG
ACCGAGCGCG TAATCACTTT ACAGAACATG AAAAAGATGG ACGAGACCCT GCCTAAGGGC
CAATTTATCA GGGTGCATAA ATCGTATATC ATTGCCCTGG ATAAAATTGA AAGCATTGAA
CGCAGCAGGA TTTCTATAGG TGAAAAGGTA ATTCCTATCG GGGATACCTA CAGGGATGAG
TTTTTCCGGC ACATCGACAA TAAAAATATC TAA
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| Protein sequence | MTKLKCIAVD DEPLALDIIE DYVSKVPFLE LIKRTENAIE ALQMVQAGGV DLVFLDIQMP
ELTGIQFLKI ANGKSNYIFT TAYSQYALES YDLNVSDYLL KPIAFDRFYK AVEKVHNQLK
VGQPAENAIQ PLLTPATAVA PANPIQDFIF VKTEHKIQKI ELDNILYIEG LKDYISIFTK
TERVITLQNM KKMDETLPKG QFIRVHKSYI IALDKIESIE RSRISIGEKV IPIGDTYRDE
FFRHIDNKNI
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