Gene Phep_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0216 
Symbol 
ID8251301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp253492 
End bp254526 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content41% 
IMG OID644933866 
Producthistidine kinase internal region 
Protein accessionYP_003090504 
Protein GI255530132 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.366822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA GGGGCCCCTT AGTTGTACAT CTTTTTTTCT GGTTAATTAT ACTATCCATA 
TTGCTTTGGG ATACTTTTAG CGGTCACCAA ACACCGTCGA GGTATGAAGT TGCGGTTAAA
CTGGGGTATT TTGCCATTAT CAACCTTTCT ATATTTTACA TCAACTATAC ACTGCTCATC
CCCATTCTTG TTGAACAAAA AAAGAAGTAT GGCCTGTATA TCCTTTCTAT CTTTTTGCTG
ATTGCGGTAA TGGTGATCAT CAAAACGGTG GTGGCCAGTT TAAACAGTGA TTTCTTTTTA
ACCTATTTTA GCCAGGATTC GGGTAAGATC GAATACTACG AGATCACGAA GTACGTCGTG
TTCGCTATTT TTGTATCCGG CTTTTTTGTG GTGGTGAGTG CTTTACTGAA GTTTGCGGTC
GACTGGTTTG GGAGCGAACG GGTGCAGCGC GACCTGCTTA GCGAAAAACG GGATATGGAA
CTGCAGTTTT TGAAATCGCA GTTGAACCCG CACTTTCTGT TCAACTCTTT AAACAACATT
TATTCGCTGG CTTATCAGAA ATCGGATAAA ACAGCAGATG CAATATTGAA ACTTTCGGAG
ATCATGCGCT ACATGATCTA TGAGAGTAAT GACAGCTGGG TATCCTTAAG TAAGGAAATT
GCTTATGTGC AAAGTTTTAT TGAACTGCAG AAACTGAGGT TTAAAGATGG TGCCGCGGTA
GAGTTTACCA TAAACGGTGA GATTGATGAC CAGCCGGTGG TGCCCCTCAT CCTGATCTCT
TTTGTGGAGA ATGCATTTAA ACATGGGGTT GCCAACGACC CCAGCGATCC CATCCGCATC
AATATTATAG CCAATCAGAA AATATTGCAT TTCAGCATTA CCAATAAAAA GAACAAACAT
AACAAAGACC AGATGGGTGG GGTTGGCCTG AACAATGTTG AGCGACGGTT ACAGTTGCTC
TATCCCGAGC GATATAAATT AAATATCGTA AATTCGGCTA CTCATTATAC CAGTGAATTA
ATGTTAGATA TATGA
 
Protein sequence
MKSRGPLVVH LFFWLIILSI LLWDTFSGHQ TPSRYEVAVK LGYFAIINLS IFYINYTLLI 
PILVEQKKKY GLYILSIFLL IAVMVIIKTV VASLNSDFFL TYFSQDSGKI EYYEITKYVV
FAIFVSGFFV VVSALLKFAV DWFGSERVQR DLLSEKRDME LQFLKSQLNP HFLFNSLNNI
YSLAYQKSDK TADAILKLSE IMRYMIYESN DSWVSLSKEI AYVQSFIELQ KLRFKDGAAV
EFTINGEIDD QPVVPLILIS FVENAFKHGV ANDPSDPIRI NIIANQKILH FSITNKKNKH
NKDQMGGVGL NNVERRLQLL YPERYKLNIV NSATHYTSEL MLDI