| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0213 |
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| Symbol | |
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| ID | 8251298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 250351 |
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| End bp | 252357 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644933863 |
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| Product | TonB family protein |
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| Protein accession | YP_003090501 |
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| Protein GI | 255530129 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.110035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAG CACATTACAT CCTGCAGGTC AACATCTACT TAATTGTATT TTATGGCTGC
TATAAGGTAT TGTTAGACAA AGAAACTTAT TTCCTCCTCA ACAGGATTTA CCTGCTTGCT
GCGGGTTTAC TTTCCCTGGC CATTCCCTTT TTAAGGTTCG AATGGTTTGC CACGCAGCCT
GTTGCCCAAC CGCTCTACGT TGGGGTAGAC CAGCTGAACA GTCTGATGAC CCAGGTAATT
GTGGCGCCCC AAAAGCCTGA AAGCTATAGC CCCGGCAACC TTATCGTGAT CCTTTACCTG
GCAGGCATCC TGTTTTTTAC GGGTAAACTG ATCTGGCAAT TGCTTACCGT AGGAAAACTT
CTGAAAAAAA CAGGCCCGGG TACAGCATTT TCTTTTTTTG GCCAGAAAAG GATCGATAAC
AATTTGCCCC AGCTGCAAAC CATCCACAAA CACGAAGAAG TACATATCCG CCAGCTGCAC
AGTGCCGATG TATTGTTTTT CGAGCTGCTG GGCATATTTA CCTGGTTCAA TCCGGTCGTC
TATTTTTACA AACGTTCCTT AAAGAATATC CACGAGTACC TGGCCGATGA AGCAGCAGCT
ACCTTTCAGG GCGATAAAAA AGCTTATGCC CTGTTATTGC TCAGCAGTGC CTTCGGCGTA
CCTGCCAGCA AACTAACCAA TAGTTTTTTT AGTAAGTCAT TGATCAAAAA GAGAATATTT
ATGCTCCATA AACAAAGATC CAGAAAAACA GCCATTTTAA AATATGGTAT GTTTGTACCG
CTTCTAGCCC TCGCACTCAT CATGTCGTCG GCCACCATCC GCAACAATGT CCAGATCCAG
CAAATTGCAA ACGAGATCCC CCTAAACAAT CCGGTTGAGG TGGTTAAAGA AGTGGTAACC
CCCGTACTGC AACAGGCTGT AACTGAAAGG GTGAAAACCG CTAAAAAAAC ACCTCAGGAA
ATTGTCCTTG TGCCAGCTGC CGAAAAACCT GTGCAAACAG CAGCAACGCC CGACTGGAAC
AATTTTTACA AGTTCATTAA AACAATTATA CGCTATCCCT CAATTGCCCG GCAACAAAAA
ATACAGGGCA GCACCATCAT TAAATTTACC ATAGCAGATG GCCAGCTCGA AAATATAGGT
ATCGCAGCAA AATTAGGCGG AGGCTGTGAC CTTGAGGCCA TGAGAACCAT CACCGCATTT
CCGATGTATA AAGGCACAAT GGATGGAAAT TACAGTATAA AGATCAAGTA TATCCTCAGT
GATACCAATA CCCCTAAAAT AAATGAAAAT ACAGCAGCCC CAAAGGACTA TACCCCATTA
AATGACATCA TGGTGGTAGC TTATGGCGGT TCTGAGACAG AGAATGAAGA CAAGGTCTAT
GATTTCGTGT CCATCGACAA ACAACCGGGA TTCGAGGGTG GTATGCAGAA TTTCTATGCC
TACCTGAAAA AAGCGATCCG CTATCCTGCA GAAGCACAAA AGAACAACAT TCAGGGCAAA
GTGTTTTTAT CCTTTATTGT AGAAAGGGAT GGCACCCTAA GTGACTTTAA AGTGGAAAGA
AAACTGGGAA GCGGCACAGA TGAAGAAGCC ATAAGGGTAT TGAAAGAATC GCCGAAATGG
ACACCAGGGA TGAAGAACGG CAAAGCAGTA CGTGTTAAAT ACAATATCCC CATCAGCTTC
ACGCTAAACA ATGGAGCTAC CCAGGTCCCG GCAGTCAATT TAATCGGGAA CAATAGCGGC
ATTATCTTCA AAGATGCCAA TGGCGGCCAG ATGAAATTTG GTGACAATGC CGCAAATTCA
CCACTTGTTG TAATAGATGG TAAAATACAG GACAAATCAG ATCTTTCTTA CATGAATCCA
GATGATATTG AATCCATCAG TGTTTTTAAA GATGCAAAAG GAACAGCACT ATATGGTGCC
AGAGCTGCAA ACGGTGTCAT TAGCATTACC ACAAAAGCAG GCAAAGCCAC CAAAACCCCT
GCAACGAATA AAAAGACAGG CGAATAA
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| Protein sequence | MSTAHYILQV NIYLIVFYGC YKVLLDKETY FLLNRIYLLA AGLLSLAIPF LRFEWFATQP
VAQPLYVGVD QLNSLMTQVI VAPQKPESYS PGNLIVILYL AGILFFTGKL IWQLLTVGKL
LKKTGPGTAF SFFGQKRIDN NLPQLQTIHK HEEVHIRQLH SADVLFFELL GIFTWFNPVV
YFYKRSLKNI HEYLADEAAA TFQGDKKAYA LLLLSSAFGV PASKLTNSFF SKSLIKKRIF
MLHKQRSRKT AILKYGMFVP LLALALIMSS ATIRNNVQIQ QIANEIPLNN PVEVVKEVVT
PVLQQAVTER VKTAKKTPQE IVLVPAAEKP VQTAATPDWN NFYKFIKTII RYPSIARQQK
IQGSTIIKFT IADGQLENIG IAAKLGGGCD LEAMRTITAF PMYKGTMDGN YSIKIKYILS
DTNTPKINEN TAAPKDYTPL NDIMVVAYGG SETENEDKVY DFVSIDKQPG FEGGMQNFYA
YLKKAIRYPA EAQKNNIQGK VFLSFIVERD GTLSDFKVER KLGSGTDEEA IRVLKESPKW
TPGMKNGKAV RVKYNIPISF TLNNGATQVP AVNLIGNNSG IIFKDANGGQ MKFGDNAANS
PLVVIDGKIQ DKSDLSYMNP DDIESISVFK DAKGTALYGA RAANGVISIT TKAGKATKTP
ATNKKTGE
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