| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0211 |
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| Symbol | sdhA |
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| ID | 8251296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 247508 |
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| End bp | 249487 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644933861 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003090499 |
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| Protein GI | 255530127 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.24526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATT TGAATTCAAA CATACCAGAG GGAGAATTAA CCACAAAGTG GACTAAGTAT
AAGTCTTCTG TGCCTTTGGT TAACCCGTCA AATAAAAGAA CGATAGAGGT GATCATTGTT
GGCTCAGGTT TAGCAGGTGC TTCGGCAGCG GCAACACTGG CTGAAATGGG TTATAAAGTG
AAGTGTTTCT GCTTCCAGGA TTCACCACGC AGAGCACATT CCATTGCAGC ACAGGGTGGT
ATCAATGCAG CAAAGAACTA CCAGAACGAC GGCGACAGTG TATACCGTTT GTTTTATGAT
ACCATTAAAG GCGGCGATTA CCGTGCACGC GAAGCCAACG TACACCGTTT GGCAGAAGTG
AGTGCAAACA TTATAGATCA GTGTGTGGCA CAGGGTGTTC CGTTGGCCAG GGAGTACGGT
GGTTTGCTGG ACAACCGCTC TTTTGGGGGT ACACAGGTGC AAAGAACATT TTATGCAGCC
GGACAAACCG GTCAGCAATT GCTGTTGGGT GCATATTCTG CTTTGGAGCG CCAGATCGGT
ATGGGTAAGG TAGAAATGTT TACCCGTCAT GAAATGCTGG AAGTAGTAAA AATTGATGGT
AAAGCACGTG GTATCATTGC CCGGAACCTG ATCACAGGTG AAATTGAGCG TCATTTCGGC
CACGCTGTAG TATTGGGAAC AGGTGGTTAC GGAAACGTTT TTTACCTGTC TACAAATGCT
ATGGGCAGTA ATGTAACCGC AGCCTGGAAA GCACATAAAC AGGGGGCTTA TTTTGCCAAT
CCCTGCTATA CACAAATCCA CCCTACCTGT ATCCCGGTTT CGGGCGACCA TCAGAGTAAG
CTTACGCTGA TGTCTGAATC ACTGCGGAAT GATGGCAGGA TTTGGGTGCC GAAGAAAAAA
GATGATCTGC GCAAGGCTTC TGAAATCCCT GAAGATGAAA GGGATTATTA CCTGGAGCGC
AGATACCCTG CTTTTGGTAA CCTGGTACCG CGCGATGTAG CTTCAAGAGC GGCAAAAGAA
CGCTGCGATG CGGGTTATGG TGTGGGCGCG TCTAAACTGG CTGTATACCT CGATTTTAAA
GCCAATACAG AACGTTATGG TCGTATTGAG GCTGCTAAGG CCGGAAACCA CAATCCTGAT
AAGGAAACCT GTATGCGTCT GGGTACTGAG GTGATCAAGG CAAAATATGG TAACCTGTTT
GATATGTATG CACAGATCAC AGGCGAAAAT CCTTACGAAA CACCGATGCG GATCTATCCT
GCAGTGCATT ATACCATGGG CGGACTTTGG GTAGATTATA ACCTGATGAC CAATGTACCG
GGGCTGTATT GCACAGGTGA GGCTAATTTC TCTGACCATG GTGCCAACCG CTTGGGGGCC
TCGGCATTGA TGCAGGGACT GGCAGATGGT TATTTTGTAT TGCCTTATAC CATTGGGGCA
TATTTATCGA AAGAGATCTC TGTGAAGGCC ATTCCTACAG ATCACCCGGC TTTTGTCGAA
GCCGAGGCAA GGGCAAAAGG TATTCTGGAT ACGCTGATCA ACATCAAAGG GACAAAATCG
GTAGATCATT TCCATAAACG CCTGGGTCAC ATCATGTGGG AAAAATGCGG TATGGCCCGT
AACGAAAAGG GATTGAAGGA AGCGATTGAA GAGATCAGAG CATTGCGTGC CGAGTTCTGG
AGAGATGTTC GCGTGCCGGG ATCGGTTGAT GAGCTGAATA CGGAACTGGA AAAGGCAGGC
CGTGTAGCCG ATTTTATAGA ACTGGGTGAG TTGATGTGCA TAGATGCATT AAACCGCAAC
GAAAGCTGCG GCGGCCATTT CCGCGAAGAA TATCAAACGG AAGAAGGTGA GGCACTGCGT
GACGATGAGC ATTATGCTTA CGTTGCCGCC TGGGAATTTA AGGAAGGAGT AAACTTTGAA
CTGCATAAAG AAGAGTTGAA GTTTGAAAAT ATTAAAGTAG CACAAAGAAG TTATAAATAG
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| Protein sequence | MSDLNSNIPE GELTTKWTKY KSSVPLVNPS NKRTIEVIIV GSGLAGASAA ATLAEMGYKV
KCFCFQDSPR RAHSIAAQGG INAAKNYQND GDSVYRLFYD TIKGGDYRAR EANVHRLAEV
SANIIDQCVA QGVPLAREYG GLLDNRSFGG TQVQRTFYAA GQTGQQLLLG AYSALERQIG
MGKVEMFTRH EMLEVVKIDG KARGIIARNL ITGEIERHFG HAVVLGTGGY GNVFYLSTNA
MGSNVTAAWK AHKQGAYFAN PCYTQIHPTC IPVSGDHQSK LTLMSESLRN DGRIWVPKKK
DDLRKASEIP EDERDYYLER RYPAFGNLVP RDVASRAAKE RCDAGYGVGA SKLAVYLDFK
ANTERYGRIE AAKAGNHNPD KETCMRLGTE VIKAKYGNLF DMYAQITGEN PYETPMRIYP
AVHYTMGGLW VDYNLMTNVP GLYCTGEANF SDHGANRLGA SALMQGLADG YFVLPYTIGA
YLSKEISVKA IPTDHPAFVE AEARAKGILD TLINIKGTKS VDHFHKRLGH IMWEKCGMAR
NEKGLKEAIE EIRALRAEFW RDVRVPGSVD ELNTELEKAG RVADFIELGE LMCIDALNRN
ESCGGHFREE YQTEEGEALR DDEHYAYVAA WEFKEGVNFE LHKEELKFEN IKVAQRSYK
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