Gene Phep_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0192 
Symbol 
ID8251277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp222913 
End bp223938 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content42% 
IMG OID644933842 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003090480 
Protein GI255530108 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.1922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAA GTGTTTTGGT GTTAATTGCT GCCTTTGCAG TGGGCCTGTC TATCGGATTG 
GTTAATTTCT ATTTCCAGCA AAGCTGGTAT TTTATGCTGG TTTCCTTTGT GGTAACTTTT
ATCACCAGTT TTATTGTTTT TTATTATCTG CTGGAGAAAT ATATCTATTC AAAAATAGTG
CTCATCTATA AGATGATCCA TAACCTGAAA CTGGGTAAGG ACCTTAAAGA TGCATTGGGC
GAGTATGTAA GTTCTGACCC CATCAATGAT GTGGAACAGG AAGTAAAAGA ATGGGCGGGT
GCTAAAAAAC GTGAGATTGA AGTGCTGAAA AAACAGGAAC AGTTCAGACG TGAGTTTTTA
TCCAATGTAT CGCATGAATT TAAGACCCCA CTGTTTGCCA TACAGGGTTA TATCGAAACT
TTGCAGGACT GCCTGACGGA AGACCCCGAG ATGGCTGCTA AATTTTTGGA TAAGGCAGAA
AAGAATGTAG AGCGGCTGAG CTACCTGATT ACCGACCTGG ATTCTATTTC CAAGCTGGAA
ACAGGGGAAA TTCCCATCAA TTATGAGAAG TTCGACTTCG TGCCACTTGC CCGGGAAGTA
ATGGACGGTC TGGAAGATAC AGCCCGTAAA AGGAACATTA CCCTTTCTTT TAAAGACAAA
TATACCCACC CTGCCTTTGT AAGGGCAGAC CGTGAAAAAA TCAGACAGGT ACTGATCAAC
CTGATCCACA ATTCATTAAA ATACGGAAAG GAATATGGCT CAACTGCCAT TAAGATCTTT
GAACTGCACG ATCAGTACCT GATAGAAGTA ACTGATGATG GTATCGGTAT AGATGAAAAA
CACCTGTCGC GACTTTTTGA GCGTTTTTAC AGGATCGATT CGCACAGATC AAGGGAGGAA
GGTGGTACCG GACTGGGCCT GGCCATTGTA AAACATATTC TTGAGGCCCA TGAGCAAATT
ATATCTGTAC GGAGTACCCT GCAGATAGGG ACTACCTTTG CCTTTACCCT GGAAAAGATT
GGTTAA
 
Protein sequence
MKLSVLVLIA AFAVGLSIGL VNFYFQQSWY FMLVSFVVTF ITSFIVFYYL LEKYIYSKIV 
LIYKMIHNLK LGKDLKDALG EYVSSDPIND VEQEVKEWAG AKKREIEVLK KQEQFRREFL
SNVSHEFKTP LFAIQGYIET LQDCLTEDPE MAAKFLDKAE KNVERLSYLI TDLDSISKLE
TGEIPINYEK FDFVPLAREV MDGLEDTARK RNITLSFKDK YTHPAFVRAD REKIRQVLIN
LIHNSLKYGK EYGSTAIKIF ELHDQYLIEV TDDGIGIDEK HLSRLFERFY RIDSHRSREE
GGTGLGLAIV KHILEAHEQI ISVRSTLQIG TTFAFTLEKI G