| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0188 |
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| Symbol | |
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| ID | 8251273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 219280 |
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| End bp | 219858 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644933838 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003090476 |
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| Protein GI | 255530104 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.630653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGTTTA TAAAGAATAA CGCCCGGATA CAGGAGCAGG ACGATGCTGC TTTAATTGCA
CGCTATAAAA GCGGAAGCGA TCTGGAGGCT TTGGGCGCGC TTTATAACAA GTATATGCAC
CTGGTATTCG GGGTGTGCTT AAATTATCTG AAAGACGAGG AGCAAAGCAA GGATGCTGTG
ATGCAGATTT TTGAGGAACT GGTGGTAAAG CTGAAAATAC ATGAGGTGCA GAACTTTAAA
AGCTGGCTGC ATGTGCTTAC CCGGAACCAT TGTTTAATGG CTTTAAGGAA ACAATCAAAA
CATACTACCG TTTCAATTGA GGATACTTTT GTGGAAAACA CAGATTTTGT GCATCTTGAT
ATGGATGATA CAAAAGAGAG GAAGCTTACC GTTATGGAAA AGTGTATGGA AACACTTCCG
GAAGAGCAGC GTTTAAGTGT AGACCTGTTT TATCTGCAGG AAAAATGCTA TAAGGAAGTG
GCCGATATTA CTGGTTATGA TATGCTTAAA GTAAAAAGTT ATATCCAGAA TGGAAAAAGA
AATCTTAAAA TTTGTATAGA AAAGAAGAGC AGTGAATAA
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| Protein sequence | MKFIKNNARI QEQDDAALIA RYKSGSDLEA LGALYNKYMH LVFGVCLNYL KDEEQSKDAV
MQIFEELVVK LKIHEVQNFK SWLHVLTRNH CLMALRKQSK HTTVSIEDTF VENTDFVHLD
MDDTKERKLT VMEKCMETLP EEQRLSVDLF YLQEKCYKEV ADITGYDMLK VKSYIQNGKR
NLKICIEKKS SE
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