Gene Phep_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0177 
Symbol 
ID8251262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp207563 
End bp208552 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content44% 
IMG OID644933827 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003090465 
Protein GI255530093 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA AAATAGCATT GCCCATTTTT ATACTTTGCT GCACAGCCTT AACGGCATTG 
GCACAAAAAA CGGACACTTT ATCCATCACT TTGGAAAATG TCAAATACGC CTATCCTGTA
AAATATTTTC CGATAACAAC AGAAGGACAG GATGTACGCA TGGCTTATAT GGATATTGCT
CCAACCCAGC TGGCCAATGG ACGTACTGTA ATGCTTTTTC ATGGTAAGAA CTTTGGAGGA
TATTACTGGA CGGAAGTTAT AAAATCGCTG ACCAGCAGGG GCTTCAGGGT GGTTGTGCCA
GACCAGATCG GTTTTGGTAA ATCGTCCAAA CCCTTTATAC ATTACAGTTT CCATCAGATG
GCCGCCTGGA ACAAGGCATT GCTGGATGCG TTGGGCATTC AGAAGGCAAG TATCCTGGGA
CATTCCATGG GAGGCATGCT GGCCACTCGT TTTGCGCTGA TGTATCCTGA ACAAACCGAA
AAGCTGCTCC TCGAAAACCC GATAGGATTA GAAGATTATC GTAGGTTTAT ACCGTATGTG
ACTACGGAGG AACAATATAA ATCGGAGCTG AAAACTACGG CTGAAAGCGT TCGCAAGTAT
TATCAGAGTT CTTATTTTAC CTTGTGGAAA CCGGAATATG AAGAACTGGT ACGTATAGCC
GGTGGTGTTA CGTATAGTGC AGATTTTCCA CGCTGGGCAA AAGTTGCGGC CATGACGTTT
ACGATGATCT ATGAGCAGCC AGTGGTATAT GAGTTTATCA ATATAAAGGT ACCCACCGTG
CTGTTTATTG GTAAAGAAGA TAGAACTATA GTAGGCAAAG GGCTGCTTAG TCCGGATCAA
CAGGCTTTAT ACGGACAATA CAGGTTTTTG GGCAAACAAA CTGCAGCTAA AATTCCGGGT
GCCAAAATTA TTGAATTTGA CGGTTGCGGC CATATCCCAC ATATAGAAAT CCCTACTGAG
TTTACTGTAG CCCTGCTGGG CAGTTTATAG
 
Protein sequence
MLKKIALPIF ILCCTALTAL AQKTDTLSIT LENVKYAYPV KYFPITTEGQ DVRMAYMDIA 
PTQLANGRTV MLFHGKNFGG YYWTEVIKSL TSRGFRVVVP DQIGFGKSSK PFIHYSFHQM
AAWNKALLDA LGIQKASILG HSMGGMLATR FALMYPEQTE KLLLENPIGL EDYRRFIPYV
TTEEQYKSEL KTTAESVRKY YQSSYFTLWK PEYEELVRIA GGVTYSADFP RWAKVAAMTF
TMIYEQPVVY EFINIKVPTV LFIGKEDRTI VGKGLLSPDQ QALYGQYRFL GKQTAAKIPG
AKIIEFDGCG HIPHIEIPTE FTVALLGSL