Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0170 |
Symbol | |
ID | 8251255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 198909 |
End bp | 199463 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644933820 |
Product | NLP/P60 protein |
Protein accession | YP_003090458 |
Protein GI | 255530086 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAA AGTTTCTGTT TTCTTCCCTC ATTGGTTTGT GCAGTTTAAC GGCTGTTAAA GCACAAACAA AAACAAAAGA GACCAATAAA TTAGCAGATC CTGACAATTT AGCTTCCCAG TATTTTTCAC AGGTTATGGG TGTTGCTGTA GACGCAACTT CTAATGTAAA ACTGTATAAA TTCATTTACG AATGGATTGG CACACCTTAC AGATTTGGTG GAAATACACA GAAAGGAATA GACTGTTCGG CATTTACCAA AGCGATCTAC GACAAAGTTT TCAACACTAC CATATTGCGC AATTCAAGGG ATATCTTTAG CATGGTTGAT CCATTGCCGA AAGACGAACT GAAAGAGGGC GACCTGGTAT TTTTTAAAAT AAAAAGCAGG AGCATTACCC ATATAGGGAT CTACCTTGGC GACAATCGTT TTGCCCATGC CTCATCCAGC AGAGGGGTGG TCATCAGCAA TTTGAATGAA CCTTATTACT CAAGATATTT TTATAAAGGC GGCAGGATAC TGGATGAAGT TAAAGAAGAC CTGATCCAGG AATAA
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Protein sequence | MIKKFLFSSL IGLCSLTAVK AQTKTKETNK LADPDNLASQ YFSQVMGVAV DATSNVKLYK FIYEWIGTPY RFGGNTQKGI DCSAFTKAIY DKVFNTTILR NSRDIFSMVD PLPKDELKEG DLVFFKIKSR SITHIGIYLG DNRFAHASSS RGVVISNLNE PYYSRYFYKG GRILDEVKED LIQE
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