Gene Phep_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0163 
Symbol 
ID8251248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp192265 
End bp192702 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content45% 
IMG OID644933813 
ProductProtein-tyrosine phosphatase, low molecular weight 
Protein accessionYP_003090451 
Protein GI255530079 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.147103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAT TGATGGTTTG CCTGGGTAAC ATCTGCCGTT CGCCGCTGGC AGAGGGCATC 
ATGAGACATT TGGCGGATGA ACAGCAACTG GGCTGGGAAA TCTCTTCGGC AGGGACCGGC
GACTGGCATG TCAACCAGCC GGCCGACAGG AGAAGTATTG CAGTGGCTAA AAAGTTTGGA
TATGATATTT CAGCGCAAAG GGCCAGGCAT TTCAATGCGA AGATGTTTGA TGAATTTGAC
CATATCCTGG TTATGGATCG TCAAAATTTA AGAGATGTGC TGCAACTTGC TTCAAACGAC
CGGCAGCGTA AGAAGGTGAG ATTGTTTTTA ACAGATGACC TTGAGGTTAC AGATCCGTAT
TATGACGATA ACTTGTTTGA GCCGGTGTTT TTAGGTATAG AAGAACGGTG TAAACAACTC
ATAAAAGAGA TAAAGTAA
 
Protein sequence
MKLLMVCLGN ICRSPLAEGI MRHLADEQQL GWEISSAGTG DWHVNQPADR RSIAVAKKFG 
YDISAQRARH FNAKMFDEFD HILVMDRQNL RDVLQLASND RQRKKVRLFL TDDLEVTDPY
YDDNLFEPVF LGIEERCKQL IKEIK