Gene Phep_0151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0151 
Symbol 
ID8251236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp178728 
End bp179891 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content43% 
IMG OID644933801 
Productglycosyl transferase group 1 
Protein accessionYP_003090439 
Protein GI255530067 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.105707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TTTTGTTTTT CATGCCCGAT AATCCTTTAA AAAAAAATGC CGGCAACAAA 
ATCCGGGCAT TAAGCTTCCT GGATTATTTT AAATCCAGGG GTTTTCAGGT CCACTTTGTA
AGCGAGTACT ACTGGGGGGA ATGGAACGAA ACGGACATCC GGGAATTTGA AAACAGCGGG
CTCGCCAGTC AAACCTGGGT GCTGCCCAGA AAGGCTCCTA AAAAGAATCT GCTTTACTAC
TTCTTCTGTT ACAAACTGCC TAATTTTTTC TATCAGAAAA AGTGGGGCTT GTTCCCGCTA
AACTTTCCGG AGTTGGTTAG CATTCGCCTA AAACGGGCTT TCAATAAAAT ACTCCGGCAA
AACCAATACG ATTACATCTT CATCAACTAT GCAAGCTGGT CATCCCTGAT AGAAAATAAC
CCAAACCTCG GAAAAGCAAC AACCCTATTA GACACCCACG ATTTTTTAAC TGCCCAGCAT
CAGGAAAAAT ATCCTATAGG TGCTTCCTTT CAGGAAGAGA TCAGGAGGCT GTCCCTGTTT
GATAAAGTAC TGGCCATCTC TGTTGAAGAA CAATATCTTT TCAGTCAGTT CTGTAAAACT
GAAATCGCCC TGGCCCCAAT GATGATCAAA AAGTCAGAGG CCAGTCCAGT TCCGGTAGCA
GAACGGAAGT TCGATCTTAT CTATGTGGCC AGTAAAAACC CGCATAACAT AGAGGCCGCA
AACTGGTTCA TGACGCAAGT GTACCCTCTG CTTCCAAAAA CTATAAACAT CTGTATCATC
GGACAGGTTA CTGCTTTTAT TAAAGGGAAT TACAATAACA TTACCCTTAT CCCTTTTGCA
ACCGAGCTGG ACACCTGCTA TCATCAGGCA AAAATCGCGA TATGTCCGAT GCTTTCAGGT
ACGGGAACAA AAATTAAAGT GATTGAGGCC CTATCCCATC ACCTGCCTGT AGTATGCAAC
ACCAGGGGGG TAGACGGCCT GATCAATAAA ACCAATAACG GCTGCCTGGT GAGCGATAAT
CCAAAAGAAT TCAGCAGGCA CATCATTACC CTGCTGGAAC AACCTGAAAT CTATCGGCAG
CAGTCTGTTT ATGCAAAACA GGCATTTGAA TCAGATTACG AACAGGAAGC CCGTTATCAG
AAACTAGACC AGCTATTTTT ATGA
 
Protein sequence
MKKILFFMPD NPLKKNAGNK IRALSFLDYF KSRGFQVHFV SEYYWGEWNE TDIREFENSG 
LASQTWVLPR KAPKKNLLYY FFCYKLPNFF YQKKWGLFPL NFPELVSIRL KRAFNKILRQ
NQYDYIFINY ASWSSLIENN PNLGKATTLL DTHDFLTAQH QEKYPIGASF QEEIRRLSLF
DKVLAISVEE QYLFSQFCKT EIALAPMMIK KSEASPVPVA ERKFDLIYVA SKNPHNIEAA
NWFMTQVYPL LPKTINICII GQVTAFIKGN YNNITLIPFA TELDTCYHQA KIAICPMLSG
TGTKIKVIEA LSHHLPVVCN TRGVDGLINK TNNGCLVSDN PKEFSRHIIT LLEQPEIYRQ
QSVYAKQAFE SDYEQEARYQ KLDQLFL