Gene Phep_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0147 
Symbol 
ID8251232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp174593 
End bp175609 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content39% 
IMG OID644933797 
Productglycosyl transferase family 2 
Protein accessionYP_003090435 
Protein GI255530063 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCAA AAATAACCGT TTTTATGGCT GCTTACAATG CGGCAAATTA TATAAATGAA 
TCAATAAAAA GTATTTTAAG CCAAACTTTT ACAGATTTTG AGTTATTAAT TGTCAATGAC
GGATCAACAG ATGAGACCGT TCAGCTTGTT CTTGAATTTA ATGATTCCCG CATTAGGTTG
GTCCACAATG ATAAAAACCG TGGCCTGGTC TATACCAGGA ATGTTGCCTT AAAGGAAGCA
AGGGGCGAAT ACCTGGCCAT ATTGGACAGC GATGACATCG CCCTCCCCAA CCGGCTCGAG
CTTCAATATC GTTTTCTGCA GGAAAATCCA GGCTATGCTT TATGCGGCGG GCATGGTAAA
GTAATTGATA AAGATGGAAA GTTACTGGAT GACAACCGCC TAATTGTGCC AACCGGAAAC
GAGCACATCA AAATGACGCT CCTCTTTATC AATACCTATG TAAATTCCAC AGTGATGTAT
AAAACCACTG TACTAAAGGA ACTACATGGC TATAAAGATT TTGCACCGGC AGAAGATTAC
GAGCTGTTTA TTCGCATTGC AGAAAAATAT CCTGTTGATA ACCTGGACGA AGTGCTGGTT
AAATACAGGG ACCACGAGAG TAATACTTCC GTACTTCATG CCGATACAAG CTGGACCAAA
CTCTATGAGA TCAAAAAAAT ACAACTGACC AACTTACAGA TCCAACCCGA AAAAAGGCTT
ACAGATGCCT TATACAGCAT CCTGATGTGG AGCTATAATT CAGACCTTTC TGATTATCTT
TACCTGTTTA CCAAATTAAA GTACGCAAAC CGGGCATTAA ACAAATATCC CATCATCCCT
TTCGAAAAAA TGTTGTTTAA TTACTGGTTC AAAATTATTT ACACCAAAAA AGCTAAAATG
AATGCCCTTC CATTATTATT AAACAAACAT CTTTTTAGCT GGTCTTTTGT AACTTCGCGT
CAACTTAGAA AAGCATTTAA GCTTTCCATT AAAGGAATTG GTCGTTTATC CAAATAA
 
Protein sequence
MAPKITVFMA AYNAANYINE SIKSILSQTF TDFELLIVND GSTDETVQLV LEFNDSRIRL 
VHNDKNRGLV YTRNVALKEA RGEYLAILDS DDIALPNRLE LQYRFLQENP GYALCGGHGK
VIDKDGKLLD DNRLIVPTGN EHIKMTLLFI NTYVNSTVMY KTTVLKELHG YKDFAPAEDY
ELFIRIAEKY PVDNLDEVLV KYRDHESNTS VLHADTSWTK LYEIKKIQLT NLQIQPEKRL
TDALYSILMW SYNSDLSDYL YLFTKLKYAN RALNKYPIIP FEKMLFNYWF KIIYTKKAKM
NALPLLLNKH LFSWSFVTSR QLRKAFKLSI KGIGRLSK