Gene Phep_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0146 
Symbol 
ID8251231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp173693 
End bp174544 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content40% 
IMG OID644933796 
Productglycosyl transferase family 11 
Protein accessionYP_003090434 
Protein GI255530062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TCAGATTTCT GGGTGGACTG GGCAACCAGA TGTTTCAATA CGCATTCTAT 
AAATCCTTGC AACACAGATT CCCCCATGTT AAGGCAGATT TACAAGGTTA CCAGGAATAT
ACACTTCACA ATGGCTTTGA ACTGGAACAT ATCTTCAATA TAAAAGTAAA CAGCGTCTCC
TCTTTTACAA GTGATCTTTT TTACAACAAA AAATGGTTGT ACAGAAAGCT TAGAAGAATC
CTCAACCTGC GAAATACCTA TATAGAAGAA AAAAAACTAT TTTCTTTCGA TCCATCTCTG
TTAAACAATC CCAAAAGCGC TTACTATTGG GGATACTGGC AAAATTTTCA ATATTTTGAG
CACATAGCAG ATGACCTGAG AAAAGATTTT CAGTTCAGGG CTCCCCTGTC CGCACAAAAC
CAGGAGGTTT TAGATCAGAC TAAACTCAGT AACAGCATAT CCCTCCACAT CAGAAGGGGC
GACTACATAA AAGACCCTTT ACTTGGTGGC CTGTGCGGCC CCGAGTATTA CCAGACAGCG
ATCAACTACA TTACATCCAA AGTCAACGCC GCCAGATTCT TTATTTTCTC CGATGATATC
GACTGGTGTA TCGCTAACCT TAAGCTCCAG GATTGTAGCT TTATATCCTG GAATAAAGGA
ACATCAAGTT ATATCGACAT GCAGCTAATG AGTAGCTGCA AACATCATAT TGTTGCAAAC
AGCAGTTTTA GCTGGTGGGC AGCATGGCTA AATCCCAATC CGGATAAAAT TGTCATTGCT
CCTGAAAAAT GGACAAATGA CAAGGATATA AATGTCCGCA TGTCATTTCC TCAAGGTTGG
ATCAGCTTAT AA
 
Protein sequence
MKIIRFLGGL GNQMFQYAFY KSLQHRFPHV KADLQGYQEY TLHNGFELEH IFNIKVNSVS 
SFTSDLFYNK KWLYRKLRRI LNLRNTYIEE KKLFSFDPSL LNNPKSAYYW GYWQNFQYFE
HIADDLRKDF QFRAPLSAQN QEVLDQTKLS NSISLHIRRG DYIKDPLLGG LCGPEYYQTA
INYITSKVNA ARFFIFSDDI DWCIANLKLQ DCSFISWNKG TSSYIDMQLM SSCKHHIVAN
SSFSWWAAWL NPNPDKIVIA PEKWTNDKDI NVRMSFPQGW ISL