Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0140 |
Symbol | nusA |
ID | 8251225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 164881 |
End bp | 166116 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644933790 |
Product | transcription elongation factor NusA |
Protein accession | YP_003090428 |
Protein GI | 255530056 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATA TTAATTTAAT CGATTCATTT CAAGAGTTTA AAGACTTCAA GAACATCGAC CGTCCTACAG TGATCAGTGT GCTGGAAGAG GTATTTCGCA GTATGCTGCG CAAAAAATAT GGTACTGATG AGAATTGTGA CGTAATTGTT AACCCGGATA ACGGTGATTT GGAAATCTGG CGTACCAGAA AAGTGATGGA GGATGGTTTT TCTGAGGATG ACGATCTGGA AATTGAACTT GCAGAGGTAA AACAACTGGA TCCGGATATG GAAGTTGGCG ACGATTACAT TGAGCAGATC ACTTTGGAAA GCTTTGGCCG CAGGGCGATT TTAGCTGCCC GTCAGACCCT GGTTTCTAAA GTTCTGGAAC TGGAGAAAGA CGAGATCTTT AAAAAATATA AAGACAGGGT TGGTGAGATT GTGACCGGTG AGGTTTACCA GGTATGGAAA AAAGAAACCC TGGTGCTGGA TGATGAAGGC AACGAGCTGA TGATGCCTAA AACAGAGCAG ATACCGGCCG ATTATTTCAA AAAAGGGGAT ACTGTACGTG CAGTGATCCT GAAGGTGGAT ATGGTAAATG CTACACCTAA GATTATCATT TCGAGGATTG CACCTGAATT TTTACAGCGC CTGTTTGAAA TTGAGGTTCC TGAGATCTTT GATGGTCTGA TCACCATTAA AAAGATTGTT CGTGAGCCAG GCGAAAGAGC TAAGGTTGCG GTAGAATCTT ACGATGACAG GATTGACCCG GTGGGTGCCT GTGTAGGTAT GAAAGGTTCG CGTATCCATG GGATCGTAAG AGAGCTGAAA AACGAGAATA TTGACGTAAT TAACTTTACC AATAACATTT CACTATACAT CACAAGGGCT TTGAGCCCGG CCAAGATCAC TTCTATTAAA TTAGATGATG AAACCAAACA TGCTTCGGTT TACCTGAAGC CTGACCAGGT TTCACTGGCC ATAGGCCGTG GTGGGCATAA CATTAAACTG GCCGGTAAAT TGACCGGTTA TGAAATTGAT GTATACCGTG AAGCAGGTGA AGAAGACGAA GATGTGGACA TCGAAGAATT CTCGGATGAG ATCGATAGCT GGATCATTGA TGAGCTGAAA GCGATAGGCT GTGATACGGC AAAAAGTGTG CTGGCACTTT CTGTAGACGA ATTGGTTAAA CGTACCGATT TAGAGGAAGA AACCATCAAA GAAGTGATGA GTATTTTAAA ATCAGAATTT GAATAA
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Protein sequence | MSNINLIDSF QEFKDFKNID RPTVISVLEE VFRSMLRKKY GTDENCDVIV NPDNGDLEIW RTRKVMEDGF SEDDDLEIEL AEVKQLDPDM EVGDDYIEQI TLESFGRRAI LAARQTLVSK VLELEKDEIF KKYKDRVGEI VTGEVYQVWK KETLVLDDEG NELMMPKTEQ IPADYFKKGD TVRAVILKVD MVNATPKIII SRIAPEFLQR LFEIEVPEIF DGLITIKKIV REPGERAKVA VESYDDRIDP VGACVGMKGS RIHGIVRELK NENIDVINFT NNISLYITRA LSPAKITSIK LDDETKHASV YLKPDQVSLA IGRGGHNIKL AGKLTGYEID VYREAGEEDE DVDIEEFSDE IDSWIIDELK AIGCDTAKSV LALSVDELVK RTDLEEETIK EVMSILKSEF E
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