| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0131 |
|---|
| Symbol | |
|---|
| ID | 8251216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 156336 |
|---|
| End bp | 158174 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644933781 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_003090419 |
|---|
| Protein GI | 255530047 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.533815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGAA TAGTTGGTTA CATCGGCCAT AGAGAAGCCT GGCCCATTGT TATTAAAGGA
CTAAAAAGAC TGGAATACCG TGGCTATGAC AGTGCCGGTA TTGCCCTGAT CAATGACACG
GGGTTAAACA TTTATAAAAA AGCCGGAAAA GTACAGGAAC TGGAAAATTT TGCTGCCGGC
AAAAACCTAA ACGGTACCAT TGGCATCGGG CATACCCGAT GGGCAACGCA TGGTGCACCC
TCCGACAGGA ACTCGCATCC CCATACTTCA AACAATGGTA AACTGACCAT TATCCATAAC
GGGATCATTG AAAATTATGC CACCCTGAAA GAAGAACTGA TGACCCGTGG CCATGAATTT
AAAAGTGATA CGGATACAGA AGTACTGGTA CACCTGATAG AAGAGATTTA TAAGAATGAC
AATACGGACC TTTTAGAGGC GGTTAGGCTG GCATTGAACG AAGTAAGTGG TGCTTATGCC
ATAGTCGTGA TGGATGAAGA CCAGCCAGGG CAGCTGATTG CAGCCAGAAA AGGCAGTCCT
ATGGTGATCG GTGTAGGCGA CGGAGAGTAT TTTATTGCTT CTGATGCTAC GCCGATTGTA
GAATACACTA AAAATGTAAT TTACCTGAAC GACAATGAGA TTGCATTTCT GAAACGCGAT
GAACTGCTCA TTAAACGGCT TGACAATGTG GTACAGAGCC CTTATATCCA GGAACTGGAG
CTGAAGCTTG AGATGCTGGA AAAAGGCGGC TATGAGCACT TTATGCTGAA AGAGATCTTT
GAGCAGTCGC GCTCCATAAG AGACTGCATG CGCGGCCGGA TTTATCCCAA TGAGGGCAAG
GTTCAGCTGG GTGGCATTAA AGAGTATGCA GATAAACTGA AAAACATAGA CCGGATCATC
ATTGTAGCCT GCGGAACTTC CTGGCATGCA GGTTTGGTTG GGGAGTACCT GATTGAAGAA
TATGCACGCA TCCCTGTTGA AGTGGAGTAT GCCTCGGAAT TCAGGTACCG CAATCCGATC
ATTACAGAGA AGGATGTGGT GATTGCCATT TCGCAATCGG GTGAAACGGC CGATACCATG
GCAGCAATTG AAATGGCCAA GGAAAAAGGG GCAACAATTT TTGGGGTATG TAATGTGGTG
GGGGCTTCTA TACCAAGGCT TACCCATGCA GGTGTATATA CACATGCCGG GCCGGAAATT
GGTGTGGCAT CTACCAAGGC CTTTACCGCC CAGGTAACGG TACTTACCCT GATGGCCTTT
TACATGGCAC AGCAAAAAGG CACGCTGACC CATTCTAAAC TGGTAGAACT GCTGACCGAA
CTGGATTGTA TCCCGGCAAA GATTGAGCGG GCCCTGGAAT CGGACAGCAT GATCAGGGAA
ATTTCCGAAA AATTTAAAGA TTCGAGGAAC TGTTTGTTCC TGGGCAGGGG AAGTGGTTTC
CCTGTGGCTT TAGAAGGCGC TTTAAAGCTG AAAGAGATCT CTTATATCCA TGCCGAGGGT
TATCCTGCGG CCGAGATGAA ACACGGGCCT ATTGCTTTAA TTGACGAGGA AATGCCGGTG
GTGGTGATTG CGACTAAAAA TTCTTCATAT GAGAAGGTGA TCAGCAACAT ACAGGAAGTA
AAGGCCAGAA AAGGAATTGT ACTTGCTATT GTGACCGAGG GTGATGTTGA GGTTAGAAAA
ATGGCAGATT ACTGCATTGA GATACCTGAT GCAAGTGAGG CCTTTTTGCC TTTACTGGCT
ACCATACCTT TACAATTGCT ATCGTACCAT ATAGCGGTGC TGAGAGGCTG TAATGTAGAC
CAGCCAAGGA ACCTGGCCAA ATCGGTTACC GTAGAATAA
|
|---|
| Protein sequence | MCGIVGYIGH REAWPIVIKG LKRLEYRGYD SAGIALINDT GLNIYKKAGK VQELENFAAG
KNLNGTIGIG HTRWATHGAP SDRNSHPHTS NNGKLTIIHN GIIENYATLK EELMTRGHEF
KSDTDTEVLV HLIEEIYKND NTDLLEAVRL ALNEVSGAYA IVVMDEDQPG QLIAARKGSP
MVIGVGDGEY FIASDATPIV EYTKNVIYLN DNEIAFLKRD ELLIKRLDNV VQSPYIQELE
LKLEMLEKGG YEHFMLKEIF EQSRSIRDCM RGRIYPNEGK VQLGGIKEYA DKLKNIDRII
IVACGTSWHA GLVGEYLIEE YARIPVEVEY ASEFRYRNPI ITEKDVVIAI SQSGETADTM
AAIEMAKEKG ATIFGVCNVV GASIPRLTHA GVYTHAGPEI GVASTKAFTA QVTVLTLMAF
YMAQQKGTLT HSKLVELLTE LDCIPAKIER ALESDSMIRE ISEKFKDSRN CLFLGRGSGF
PVALEGALKL KEISYIHAEG YPAAEMKHGP IALIDEEMPV VVIATKNSSY EKVISNIQEV
KARKGIVLAI VTEGDVEVRK MADYCIEIPD ASEAFLPLLA TIPLQLLSYH IAVLRGCNVD
QPRNLAKSVT VE
|
|---|
| |