| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0129 |
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| Symbol | |
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| ID | 8251214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 154802 |
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| End bp | 155851 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644933779 |
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| Product | helix-hairpin-helix motif protein |
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| Protein accession | YP_003090417 |
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| Protein GI | 255530045 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTC AATCCGAAAT CGTAAACTGG TACTTAAACC ATAAAAGGGA CCTACCCTGG
CGGGGTACTA CAGATGCATA CATCATCTGG TTATCCGAAG TGATCCTGCA GCAAACCCGG
GTAGACCAGG GCCTGCCCTA TTTCAATAAT TTTTTACAGA ACTATCCAAC TGTGCTCGAC
TTTGCCAGCG CCAGTGAAAC ACAGGTGCTT AAACTATGGC AGGGGCTTGG CTATTATTCC
AGAGGCAGGA ACATGCTTTT TACAGCCAGG CAGGTGCGCG ACCTGCATGG TGGCGTTTTT
CCGGTGCGCT ATGATCAGCT CATTAAACTA AAAGGGATTG GCGAGTATAC CGCCGCTGCC
ATTGCTTCTT TTTCTTCAAA TGAATCAAAA GCAGTGCTCG ATGGCAATGT GTTCCGTGTA
TTGTCCCGTT ATTTCGGTAT AGAAAGCCCC ATAAACAGCA GCACCGGTAA AAAACAGTTC
GCAGACCTGG CCCAGTCACT CATCAGTGGC CAGCAGCCTT CAGTATACAA TCAGGCCATT
ATGGAGTTCG GCGCATTGCA GTGCAAACCC AAATCTCCCA ATTGTGGTAT ATGTCCGGTT
CAGGACAGCT GTTTTGCTCA AAAGCATCAT CTGGTCGGTA CGCTTCCTGT AAAATTGAAC
AAACTGAAAA AACGTACCCG CTATTTCAAC TATTTCCTGT GTATGGAAGG CGACAATATC
CTGGTCAAAA AAAGGAGCCC TGGCGATATA TGGCAGGAAT TATATGATTT TCCACTCATC
GAAACAGACC GGCCTTTTCT GGAAGATCCC GAAAAGTTTG CCCCTTTGTT ACAGGAAAGC
TTTGGCGCAG CTTGTAAAGT CAGGACTTTA TCCCATCAAA AACATTTATT AACACACCAA
ACTATATATG TTCAATTTTT TGGTTTAGAT AATTATATCA TTAACTTTAA TCAGAATGCA
GAAATAAAAT GGGTCTCATT GCCGGAATTC GACGAATTGC CGCAACCTAA AGTGATCACC
AATTTTGTTT GTAAGCATTT TATTACATAG
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| Protein sequence | MSFQSEIVNW YLNHKRDLPW RGTTDAYIIW LSEVILQQTR VDQGLPYFNN FLQNYPTVLD
FASASETQVL KLWQGLGYYS RGRNMLFTAR QVRDLHGGVF PVRYDQLIKL KGIGEYTAAA
IASFSSNESK AVLDGNVFRV LSRYFGIESP INSSTGKKQF ADLAQSLISG QQPSVYNQAI
MEFGALQCKP KSPNCGICPV QDSCFAQKHH LVGTLPVKLN KLKKRTRYFN YFLCMEGDNI
LVKKRSPGDI WQELYDFPLI ETDRPFLEDP EKFAPLLQES FGAACKVRTL SHQKHLLTHQ
TIYVQFFGLD NYIINFNQNA EIKWVSLPEF DELPQPKVIT NFVCKHFIT
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