| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0124 |
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| Symbol | carB |
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| ID | 8251209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 146943 |
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| End bp | 149759 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933774 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_003090412 |
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| Protein GI | 255530040 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAG ACACCTCCAT ACGCTCAGTA CTAATTATCG GATCGGGCCC TATCATCATT
GGCCAAGCCT GCGAATTTGA CTATTCGGGA TCTCAAGCCG CCTTATCTTT AAAAGAAGAG
GGAATTGAAG TTTCGATCAT CAATTCAAAT CCTGCAACCA TCATGACCGA CAAAGTGATT
GGGGACCATG TTTACCTCTG GCCGCTAACG GTAGATTCTA TTGAGCAGAT TTTGCAGGAA
CGCAAAATTG ATGCTGTACT GCCTACTATG GGTGGACAAA CAGCGTTGAA TCTTTGTATT
GAAGCATCTG AACGGGGCAT TTGGGAAAAA TACGGTGTTA AAGTGATCGG TGTGGATGTT
GCAGCAATCG AGAAAACTGA AAACCGGGAA GCTTTCCGCC AGTTAATGGT TGATATAGGT
GTAGGGGTAG CTACTTCAAA AATTGCCAAC TCTTTCCTGG AAGGTAAAGA AGCAGCCCAG
GAAATTGGTT ATCCATTGGT TATCCGCCCT TCTTATACAT TGGGTGGTTA TGGAGGTGGT
TTCGTACACA AAAAAGAAGA ATTTGACCAG GCTTTAAAAC GCGGGCTTGA GGCTTCTCCT
ACCCATGAGG TACTGGTAGA GCAAGCCGTT TTAGGCTGGA AAGAATATGA ACTGGAGTTG
TTAAGGGACA GTAATGACAA TGTGATCATT ATCTGTTCTA TTGAAAACTT CGATCCAATG
GGTATCCATA CAGGAGATTC CATCACCGTA GCACCGGCAA TGACCTTGTC CGACCGTTGC
TACCAGGATA TGCGTAACCA GGCTATCCGC ATGATGCGCG CCATCGGAAA CTTCGCCGGA
GGCTGTAATG TACAGTTCTC GGTAAATCCC GACAACGATG AGATCATTGC CATCGAGATC
AACCCAAGGG TATCCCGCTC GTCGGCCCTG GCCAGTAAAG CAACAGGATA TCCTATTGCC
AAAATTGCGG CTAAACTGGC TATCGGGTAT AACCTGGACG AACTGGAAAA CCAGATTACA
AAAACAACCT CGGCCTACTT TGAGCCTACT TTAGACTATG TAATCGTAAA AGTACCCCGC
TGGAACTTTG ATAAATTTAA AGGCGCCAAT ATGGAGCTGG GCCTGCAGAT GAAATCGGTA
GGTGAGGTGA TGGCTATCGG CCGTACTTTT ATCGAAGCCC TCCAAAAAGC TTGTCAGAGC
TTAGAGATCA GCCGCGCAGG TCTGGGTGCA GATGGTAAGC ACAAAAGAAA CATCGACGAA
ATCATGTATG GCCTGGAGCA TGCCAGCTGG AACAGGTTGT TCCTGATCAA GGATGCCATG
AGTATGGGTG TGCCACTTGA GTCGATCCGT AAAGTTACCC GTATCGACAA ATGGTTCCTG
TCACAAATAC AGGAATTGGT GCAGCTGGAA ACAGAGCTGA AACGTTATTC ACTAAATAAT
ATTCCTAAAG ACTTCTTCTT TACCCTAAAG CAGAAAGGTT TTTCTGATAT CCAGATTGCC
TATCTGCTGG GCAATGTAAC CGAAGATGAA GTATACGAGC GCAGAAAGTC GTTGGGCATC
AAACGCGTTT ACAAAATGGT GGATACCTGT GCTGCCGAGT TTGCTGCAAA AACACCTTAC
TATTACTCAA CTTTTGAGGA AGAGAACGAA TCTTTGCCAT CTGATAAAAA GAAAGTGATT
GTACTTGGCT CTGGTCCTAA CCGTATCGGG CAGGGTATAG AGTTCGACTA TTCTTGTGTG
CATGGTCTGC TTGCCGCCAA AGAAACCGGT TTCGAAGCCA TCATGATCAA CTGTAACCCA
GAGACGGTAT CTACCGACTT TAACATGGCC GATAAACTAT ACTTTGAACC GGTATTCTGG
GAGCATGTAC GAGAAATTAT AGAACTGGAA AACCCTGTAG GTGTAATTGT ACAGCTAGGC
GGACAAACGG CCTTAAAGAT GGCCGAGAAG CTGCACGAGA ATGGCATTAA GATTATCGGC
ACTTCTTATA ACGACATGGA TGTGGCCGAA GACAGGGGCC GTTTCTCAGA CCTTTTAAAG
GAACTTGATA TTCCCTATCC AAAATATGGT GTTGCAGAAA ATGCCGAAGA AGCAATAGTT
GTAGCAAATG AAGTGGGTTA TCCGGTATTG GTCAGACCAA GCTATGTATT GGGCGGACAG
GGAATGAGCA TCGTGATCAA CGATGAAGAC CTGGAAAAAG CGGTCGTGAA ATTATTGGGA
GACCTTCCCG GTAACCGTGT ATTGATCGAT CATTTCCTGG ATAGGGCAGA AGAAACAGAG
TCTGATTCGA TCAGTGATGG GGAAGATGTA CATATCGTTG GATTGATGGA ACATATTGAG
CCAGCTGGTA TCCACTCCGG AGATTCCAGT GCGGTATTGC CTCCGTTCAG CTTATCTGAA
AAGGTAATGA ACGACATGGA AACTTACTCT AAAAAGATTG CAAGAGCACT GAATGTCATC
GGCCTGTTGA ACATCCAGTT TGCAGTTAAA GATGAAAAAG TATATGTGAT TGAGGCCAAT
CCAAGGGCTT CCAGGACGGT TCCTTTCATT GCTAAAGCTT ATGATGTGCC TTACATCAAT
ATTGCCGCCA AGGTGATGCT GGGTGTAAAT AAACTGAAAG ACTTTACCAT CGAGCGCAAA
CTGAAAGGTT ATGCCATTAA AGAACCGGTA TTCTCCTTCA ACAAATTCCC TGAGGTAACT
AAAGAATTAG GCCCGGAAAT GAAATCGACC GGCGAGGCCA TCAGGTTCAT TAAAGACACC
GAAGATCCTT ACTTCAGAAA ATTGATTAAA GATAAATCGA TGTATTTGTC CAAGTAA
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| Protein sequence | MPKDTSIRSV LIIGSGPIII GQACEFDYSG SQAALSLKEE GIEVSIINSN PATIMTDKVI
GDHVYLWPLT VDSIEQILQE RKIDAVLPTM GGQTALNLCI EASERGIWEK YGVKVIGVDV
AAIEKTENRE AFRQLMVDIG VGVATSKIAN SFLEGKEAAQ EIGYPLVIRP SYTLGGYGGG
FVHKKEEFDQ ALKRGLEASP THEVLVEQAV LGWKEYELEL LRDSNDNVII ICSIENFDPM
GIHTGDSITV APAMTLSDRC YQDMRNQAIR MMRAIGNFAG GCNVQFSVNP DNDEIIAIEI
NPRVSRSSAL ASKATGYPIA KIAAKLAIGY NLDELENQIT KTTSAYFEPT LDYVIVKVPR
WNFDKFKGAN MELGLQMKSV GEVMAIGRTF IEALQKACQS LEISRAGLGA DGKHKRNIDE
IMYGLEHASW NRLFLIKDAM SMGVPLESIR KVTRIDKWFL SQIQELVQLE TELKRYSLNN
IPKDFFFTLK QKGFSDIQIA YLLGNVTEDE VYERRKSLGI KRVYKMVDTC AAEFAAKTPY
YYSTFEEENE SLPSDKKKVI VLGSGPNRIG QGIEFDYSCV HGLLAAKETG FEAIMINCNP
ETVSTDFNMA DKLYFEPVFW EHVREIIELE NPVGVIVQLG GQTALKMAEK LHENGIKIIG
TSYNDMDVAE DRGRFSDLLK ELDIPYPKYG VAENAEEAIV VANEVGYPVL VRPSYVLGGQ
GMSIVINDED LEKAVVKLLG DLPGNRVLID HFLDRAEETE SDSISDGEDV HIVGLMEHIE
PAGIHSGDSS AVLPPFSLSE KVMNDMETYS KKIARALNVI GLLNIQFAVK DEKVYVIEAN
PRASRTVPFI AKAYDVPYIN IAAKVMLGVN KLKDFTIERK LKGYAIKEPV FSFNKFPEVT
KELGPEMKST GEAIRFIKDT EDPYFRKLIK DKSMYLSK
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