| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0120 |
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| Symbol | |
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| ID | 8251205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 142533 |
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| End bp | 145034 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644933770 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003090408 |
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| Protein GI | 255530036 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATT ATTTAAAATC AAGCAAATTG AAAAGATCAA TTATCGCAGT GTTCACTGTG
CTGATGCTGC CATTGCTATC AATGGCACAG TTCAGCATTT CGGGAACTGT ATCCGAAAAA
TCAAACCAGG TACTACCGGG CGCTTCTGTA AGGCTCAAAA ACAAAGGGAC AGGCCTTACT
TCCGATGCCC ATGGGCAGTA CCGTTTTAAC AACCTGAAAG CAGGGAATTA TGTGCTTATT
GTAAGTTATA TTGGTTACCG GAGTACAGAA AAGGCAGTCA GTTTAAATGC AGATGCAGTA
GTAGACATAA CATTGGCCCC CGCTGCCTTC CTTGCGGATG AAGTAATTGT AAGGGCCACG
CGGGCCAATG AAAAATCGGC CACCACCTAT AAAAACATCG GTAAAAAAGA AATTGAAGAA
AACAACTTTG GCCAGGACCT GCCTTTTATA CTGAACAATA CACCGGGTGT AGTGGTCACT
TCGGATGCAG GTGCAGGTGT GGGCTATACC GGCATCAGGA TAAGGGGCAG CGATGCCAGC
AGGGTAAATG TGACCGTAAA TGGTATTCCC TATAACGACA GCGAAAGTCA GGGTACCTTT
TGGGTAAACA TGCCAGATTT TGCTTCTTCG GTAGACAATA TACAGATCCA GCGCGGAGTG
GGTACCTCTA CCAATGGGGC CGGTGCTTTT GGTGGCAGTG TAAATATACA AACGGCATCT
GTTGCCGATC AGGCTTATGC CGAACTGAAC AACGCTTATG GCTCATTTAA TACTTTAAAA
AATACCGTTA AGGTTGGAAC AGGGATGATC GACAACAAAT GGAGCTTTGA CGGGCGTTTA
TCCAGGATAA AATCGGATGG TTTTATAGAC CGGGCGGCTT CCGACCTGAA ATCATACTTT
TTGTCGGGCG CCTATTACGG TAAAAAAGAC CTGTTGCGCA TCAATGTATT TTCGGGACAG
GAAAAAACCT ACCAGGCCTG GAACGGTGTT CCCGAAGCAA AATTAAGGGG AGACCTGGTA
GCCCTGGAAG AGCACTACAA CAACAACCTG GGTTATCTGT ATTATACAGA TGCCGATCGT
GCAAACCTGT TCAATTCCAA CAACAGAACT TATAACCAGT TTACTTATAA AGACCAGAAC
GACAATTATA CCCAAAGCCA TTACCAGGCT TTATATGCCA GGCAGTTGAA CGAAAAATTT
TCGTTTAACG GGGCCCTGCA CTATACCGAT GGCGCCGGTT ATTTTGAAGA ATATAAGAAC
GACCAGAAGT TTAGCAAGTA TGGTTTGCCG GATGTAAGTG TTGGTGGTAG CCCCATCAGC
AAAACCAACC TGGTTCGTCG CCGCTGGCTG GACAATGACT TTTACGGCCT TACCTACGCG
TTCAATTACG TCCCCTCGTC CAACTTAAAC ATTACCTTAG GTGGTGCGTA TAATCAATAC
CGAGGTAAAC ACTTTGGCCA GATCATCTGG GCCCAATATG CTTCAACTGC TGCAAATGAT
TATCATTACT ATGATGGAAA AGGAAATAAA GATGATTTTA ACACCTATGC TAAGGTGAAT
TATTCTCCTG TAAGCCAGCT CAGCTTATTT GCTGATCTTC AGTATAGAAA TGTAAATTAC
GACATTACCG GCCTTGATAA AAATCGCAAC ACCCTTGATT TCCATAATAA ATACAATTTT
TTCAATCCTA AAGTTGGTGC CACTTATTTT ATAAATCAAC AAAGTAACGT TTACGCATCC
TTTAGTGTGG GGAACAAAGA ACCAAACCGC GACGACTTCA GCAATCTTAA GGCAGGGCTG
CCCGTTCCAA AATCAGAACA TTTAAATAAT GTTGAAGCAG GCTACCGCAT TACAGACAAA
GACTTTAATG TGGGCATCAA TGTTTATGGA ATGTTCTATA AAGACCAGCT TATTTTCACT
GGAGAGGTGA ATGATGGAGG AGACCCTTAC CGACAGAATG TAGATAAAAG TTCCCGCATG
GGACTTGAAA TAGATGGATC CTATAGCATT AGTCCAAAGT TTATCATCAA TGCCAATGCG
GCCTTAAGCC GGAACAAGAT CAAAAATTAC ATAGATTACG TTTCAGTATA TGATGCCAAT
TTTGACCTGA TCAATGTACA GGCTACCAGC TATGCCAATC CTGATATTTC CTTCTCACCC
AACACCGTAT TGTTCGGAGA GCTGGTTTAC AAGCCGCTTA GTGGCTTTGC AATGGCCCTG
CAAAGCAAAT ATGTAAGCAA ACAGTACATG GACAATACAC AGAATGAAAG CCGTAAACTG
GATGCCTACT GGGTAAACAA TGCCAGGCTG GGCTATGATT TTAATTTAAA GGGGATAAAA
AATATCAATA TCGGCTTGCT GATCAACAAT ATCCTGGATA AAAAATATGA GAGCAATGGC
TATACCTATA GCTCCATTTA TCCATGGGGC ATGCTAACAG AAAACTTTTA TTTCCCTCAG
GCCGGAACAA ATTTCTTACT TTCGCTGAAC CTGAAATTTT AA
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| Protein sequence | MENYLKSSKL KRSIIAVFTV LMLPLLSMAQ FSISGTVSEK SNQVLPGASV RLKNKGTGLT
SDAHGQYRFN NLKAGNYVLI VSYIGYRSTE KAVSLNADAV VDITLAPAAF LADEVIVRAT
RANEKSATTY KNIGKKEIEE NNFGQDLPFI LNNTPGVVVT SDAGAGVGYT GIRIRGSDAS
RVNVTVNGIP YNDSESQGTF WVNMPDFASS VDNIQIQRGV GTSTNGAGAF GGSVNIQTAS
VADQAYAELN NAYGSFNTLK NTVKVGTGMI DNKWSFDGRL SRIKSDGFID RAASDLKSYF
LSGAYYGKKD LLRINVFSGQ EKTYQAWNGV PEAKLRGDLV ALEEHYNNNL GYLYYTDADR
ANLFNSNNRT YNQFTYKDQN DNYTQSHYQA LYARQLNEKF SFNGALHYTD GAGYFEEYKN
DQKFSKYGLP DVSVGGSPIS KTNLVRRRWL DNDFYGLTYA FNYVPSSNLN ITLGGAYNQY
RGKHFGQIIW AQYASTAAND YHYYDGKGNK DDFNTYAKVN YSPVSQLSLF ADLQYRNVNY
DITGLDKNRN TLDFHNKYNF FNPKVGATYF INQQSNVYAS FSVGNKEPNR DDFSNLKAGL
PVPKSEHLNN VEAGYRITDK DFNVGINVYG MFYKDQLIFT GEVNDGGDPY RQNVDKSSRM
GLEIDGSYSI SPKFIINANA ALSRNKIKNY IDYVSVYDAN FDLINVQATS YANPDISFSP
NTVLFGELVY KPLSGFAMAL QSKYVSKQYM DNTQNESRKL DAYWVNNARL GYDFNLKGIK
NINIGLLINN ILDKKYESNG YTYSSIYPWG MLTENFYFPQ AGTNFLLSLN LKF
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