| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0116 |
|---|
| Symbol | |
|---|
| ID | 8251201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 138143 |
|---|
| End bp | 138706 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644933766 |
|---|
| Product | ribosome recycling factor |
|---|
| Protein accession | YP_003090404 |
|---|
| Protein GI | 255530032 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0233] Ribosome recycling factor |
|---|
| TIGRFAM ID | [TIGR00496] ribosome recycling factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACC TCATAAAGAA ACAATTACAA GATGCTCAGG CCACTATGGA AAAGGCTATT
TTGCATTGCG AAGCTGAACT GACAAAAATT CGTGCAGGTA AAGCTTCGGC AGGAATGCTG
GATGGCATCA TGGTTGATTA TTACGGAAAT CCAACCCCTT TGAGCCAGGT GGCAAGTATC
AATACTCCTG ATGCGCGTAC CTTAATTGTA CAGCCATGGG AAAAGACCCT GCTTACACCT
ATAGAACGCG CCATTATGGA AGCAAATATA GGCATCAACC CCCAAAATGA CGGTATTGTT
ATACGTCTGG TGGTTCCCCC GCTGACAGAA GAACGTAGGA AAGACCTGGT GAAAAAAGTG
AAGGAAGAAG CCGAAAGAGG TCGCATTACT GTTCGTAACA TCCGCAAGGA TGCCAACGAA
AAGATCAAAA AACTGAAAGG CGAAAGCGTT TCTGATGATG AGATCAAAAC CGGTGAAGCT
GAAGTGCAGA AGATCACGGA TGCCTATATC ATCAAAGTTG ATAAACATGC AGAAGCAAAA
GAAAAAGATA TCATGACAGT TTAA
|
|---|
| Protein sequence | MNDLIKKQLQ DAQATMEKAI LHCEAELTKI RAGKASAGML DGIMVDYYGN PTPLSQVASI
NTPDARTLIV QPWEKTLLTP IERAIMEANI GINPQNDGIV IRLVVPPLTE ERRKDLVKKV
KEEAERGRIT VRNIRKDANE KIKKLKGESV SDDEIKTGEA EVQKITDAYI IKVDKHAEAK
EKDIMTV
|
|---|
| |