| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0100 |
|---|
| Symbol | |
|---|
| ID | 8251185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 109081 |
|---|
| End bp | 109788 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644933750 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003090388 |
|---|
| Protein GI | 255530016 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.240028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAACAA CTTTAACCCT CTTACTGTCC GCATTATTAT ATGTAAGCGC CGCAGCACAA
TCTAACTTTT ACAAACTGGG AATAGGCGGC GGATTAGGAG TTACCCAGTC GTTTGCTGAT
TTGAACAAAC ACGATTACGG GCTCGCCGGT TATGGCTCTT TCGATTATTA TTTTACGCCC
TTTGTAAGTA TGGGTATTGA AGGTCAGATG GGTGAAATTA ACGGGGGCGA CATCAATACT
GACCCCAACA ACCGCCAGTT TATAAACAGC TACAAAGCCT TTGCACTGAA TGCCAAACTC
TATTTGGGTG CCCTGATCGA TTACGACAGG AGTGGTTTTA CCAATGCCAT AAAAGGACTA
TATGTTGGTG CTGGTGCTGG CGTAATCATG AATAAGATGA AGTTTGTGGT GAGGGAAAAG
CCGAACGATC CCAATGGATA TGTATTTCCG GGAAGCGACA GCTCCAAAGA TCTGCTGGTC
CCTTTAAACC TGGGCATTGC CTTTAACTTC ATGGACCGTA GTGGCTATAC CCGCTATGGC
CTCAATCTGA ATTACCAGGC CAATGTTACC CTGGGCGAGG GACTGGATGG CTATAACGAT
TCGCCAATTA AATTTAAAAG CGGCAACCCT GACGTATATA CTTATGTTTC TATTGGCCTT
AAGTATTACT TCGGACCGAT GGGCCTCTCT ATAAAATCCC TATATTAG
|
|---|
| Protein sequence | MKTTLTLLLS ALLYVSAAAQ SNFYKLGIGG GLGVTQSFAD LNKHDYGLAG YGSFDYYFTP
FVSMGIEGQM GEINGGDINT DPNNRQFINS YKAFALNAKL YLGALIDYDR SGFTNAIKGL
YVGAGAGVIM NKMKFVVREK PNDPNGYVFP GSDSSKDLLV PLNLGIAFNF MDRSGYTRYG
LNLNYQANVT LGEGLDGYND SPIKFKSGNP DVYTYVSIGL KYYFGPMGLS IKSLY
|
|---|
| |