Gene Phep_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0098 
Symbol 
ID8251183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp107469 
End bp108437 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content44% 
IMG OID644933748 
Producthypothetical protein 
Protein accessionYP_003090386 
Protein GI255530014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.543011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA TGATATACCA GCCTTTTAAA AATTTCGACT TTAAATATAA AAACTGTTTT 
TTAAGTGGCG ATACATTCCC CTCGCCTGTT GAAGAACTCA ATATCCTGCC GGCATGGCTG
CTGGAAGTGG CCAATTTTAG TGGCGAGGAA CAGATTAAAT TGCTTGATGA AAGTGTGCGT
TCCTATAATG CCTTAAAGGT TCCCTGTAAT ACTGAGGTTC GGGATCATTT TATACAACCC
CTGGAAGAGA AAATTGCTGC AGCATTTGCA AAAGGTTATG AAGGGGTTTC GCAGCTGGAT
GAAGTTGATC TTTTTAACTG GATTGGCAAG TTTATGTACA GCCTGATCTA TATAGAAATG
AATGCTGCGG TGCGTTTGCA GCAGCTAAGT GCCGATGGGC TAAACATGTC GCAGGGCCTG
ATGCACAAAT TTGGGAACCT GAACACCATG ATCCAGGGCA TTTACCTGGA TGTGGTATTT
GAAGATTTCG TGCCCTGGTC TGTCGTGGTG GTGCCCCTTG AAAATAAAGA AACAACTTTC
AGCTTTAGGG ACGAGATCAA TACACTTACT TTTTCTTTAA AACTGAAGGA CTTTGGCATC
ATTGCCTGTT TACAGGACAA TGGCACCAAT AAAAAATATC ACCGGGAAGT CCTGGACCAG
ATCGGCAACA CAGCTTTGTC GGCCGAGCAG TTTGAAGAGC TTTGTGCGCG CTTTTTTTAT
TCGGCATACC TGTTTAACCG ATTGCCCGAA TATGCCGTTA TGCCTGTTGA AGGGTCGATA
TACATTGATG CCATGCCGCT AAAAGGCACA TTGAACAAGG CGCTGTTTGA CCACTGGCAG
CATAAAACCT ATGCCCAGGT GCTGCAGGAT TTCTGGAAAC CATGGGGGCA TACGCTGTTC
GAGATCATTA AAGACCCGAC AAAGCCCATG AGCTATTTTA ACCCGCCAGC ATTACCCGAA
ACCAATTAA
 
Protein sequence
MSSMIYQPFK NFDFKYKNCF LSGDTFPSPV EELNILPAWL LEVANFSGEE QIKLLDESVR 
SYNALKVPCN TEVRDHFIQP LEEKIAAAFA KGYEGVSQLD EVDLFNWIGK FMYSLIYIEM
NAAVRLQQLS ADGLNMSQGL MHKFGNLNTM IQGIYLDVVF EDFVPWSVVV VPLENKETTF
SFRDEINTLT FSLKLKDFGI IACLQDNGTN KKYHREVLDQ IGNTALSAEQ FEELCARFFY
SAYLFNRLPE YAVMPVEGSI YIDAMPLKGT LNKALFDHWQ HKTYAQVLQD FWKPWGHTLF
EIIKDPTKPM SYFNPPALPE TN