Gene Phep_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0092 
Symbol 
ID8251177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp103632 
End bp104591 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content43% 
IMG OID644933742 
Productpeptidase M28 
Protein accessionYP_003090380 
Protein GI255530008 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGA TCTGCTTCGC CCTGCTTATT GTACTGTCGG CCCAGCTATC CCGGGCCCAG 
GACATCAATA AAATTATTAC TGCCGGATAT GTTGATCACC TGATCAAAAC ACTGAGCAGC
GACGACATGC AGGGCCGTGG TTTATATACC CCGGGTATTG ACAAAGCCGC TACCTTTATT
GAACAGCAAT TTAAAGCCAT TGGATTACAG CCTTTAAAGG GAGAAACCGG TTACCGGCAA
ACTTTTTATA AAGATTCGAC AGATAAAAGG CCTTTGTTTA ATGTAGCAGG CATGATCCCC
GGAAAATCCA GGGCCAATGA AATTGTTATT TTTTCGGGAC ATTACGATCA CCTGGGCATA
GTAAAAGGCG ATTTGCAGGA CAGCATTGCC AATGGTGCAG ATGACGATGC ATCGGGTATA
ACAGCCGTAA TTGCTTTGGC AAAATATTAT AAGGCTTTAA ACAACAATGA ACGTACACTG
GTATTTATCG CCTTTACCGC TGAGGAAATC GGAGGCTTTG GCTCCAAATA TTTCTCCAAA
AAACTGGATC CCGAGCAGGT AACGGCCATG TTTAACATAG AGATGATCGG CAAGGAAAGT
AAGTTCGGAA AAAACACCGC TTTTATTACC GGCTACGACA AATCTGATTT TGGAAAAATA
CTGCAGAAAA ACCTTGCCGG TACCGAATTT ACCTTTCATC CTGACCCATA CCCACAGCAA
AATCTCTTTT ACCGGAGCGA CAACGCCACT TTAGCGGCAT TGGGTGTACC GGCACATACC
ATCAGTACAG ATCAGATTGA TAAGGATGAA TTTTACCATA CCGTAAAAGA CGAGTACAGC
ACTTTAGACA CTTTAAACAT CCTGTACACC ATTAAAGCAA TTGCAAAAAG TGCCATCAGC
ATTGTGAAAG GTACAGATAC GCCCAGCAGG ATACCAAAGT TGGTTGACAG CCATGAATAG
 
Protein sequence
MRKICFALLI VLSAQLSRAQ DINKIITAGY VDHLIKTLSS DDMQGRGLYT PGIDKAATFI 
EQQFKAIGLQ PLKGETGYRQ TFYKDSTDKR PLFNVAGMIP GKSRANEIVI FSGHYDHLGI
VKGDLQDSIA NGADDDASGI TAVIALAKYY KALNNNERTL VFIAFTAEEI GGFGSKYFSK
KLDPEQVTAM FNIEMIGKES KFGKNTAFIT GYDKSDFGKI LQKNLAGTEF TFHPDPYPQQ
NLFYRSDNAT LAALGVPAHT ISTDQIDKDE FYHTVKDEYS TLDTLNILYT IKAIAKSAIS
IVKGTDTPSR IPKLVDSHE