Gene Phep_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0090 
Symbol 
ID8251175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp102570 
End bp103133 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content41% 
IMG OID644933740 
Productthiamine pyrophosphokinase 
Protein accessionYP_003090378 
Protein GI255530006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAC ACCATATCAT AAGGGAAAAG CAGGAACCGG CACTGTATAT CCATAATCCG 
GGTACTTTTA ATGAAGAATA CCTGGGGCAG CTGCTGGAAT GGAGCCCTAC ATTGATTGTT
AATGAGCCGG TTTATGAAAA GGTGCTGAGC ATGGGCTTAA AGGTTGACGC CGTAGTAAGC
CTGTTGGAGA CACCTGCTGT GCAGGAAAAT ACTAAACTGA TCAGAGCAAG AACAGAAGCT
TTGGATGCGG TGCTCGACTA TCTGATTGCC GAAAAATATC CGGCGGTAAA TGTAATCGAT
ACCGAAAGTA ATTTAAGGGA ACTGGGCAGT TACATTGCCG AGATCAATAT TGTGGTGTTT
ACTGCAACAG AAAAGGCTTA TGCCATTAAA AAAGGCTTTA AAGTATGGAA GCCAAAAGGC
AGTGTTTTCA GGATAGAAGT GGTGTCTTAC TTTGAAACCA GTAACCTGAT GCAGCAGGAA
AACGGTGATT TTGTGGTTAT CAGCGATGGT TTTGTAGAAT TCAATTTCAA TACAGATTAT
TTATTTATCA GTGAGGTGTT ATGA
 
Protein sequence
MSSHHIIREK QEPALYIHNP GTFNEEYLGQ LLEWSPTLIV NEPVYEKVLS MGLKVDAVVS 
LLETPAVQEN TKLIRARTEA LDAVLDYLIA EKYPAVNVID TESNLRELGS YIAEINIVVF
TATEKAYAIK KGFKVWKPKG SVFRIEVVSY FETSNLMQQE NGDFVVISDG FVEFNFNTDY
LFISEVL