| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0084 |
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| Symbol | |
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| ID | 8251168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 93777 |
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| End bp | 95621 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933733 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003090372 |
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| Protein GI | 255530000 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.190697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGAC TAAACCTTAG TTTGCTGCTA CTGCTTATGG TTCATTTTGC GCATGCGCAA
TGGAAACCTG TTCCTGGAAA AATTTCAACA GACTGGGCAG CTAAAGTAAA CCCATCCAAC
CCTTTACCTG AATATCCGAG ACCACAACTG GTCCGTAAAA GCTGGATAAA CCTTAACGGG
TTATGGCAAT ATGCCATTTT ACCTAAAGGC AGTGATAAAA TACCGGTAAG CTATGCAGGG
CAGATCCTGG TTCCTTATGC GGTAGAATCT TCACTGAGTG GTGTGGGTAA AATGGTTGGT
GAAAACAATG TATTGTGGTA TAACCGCAGC ATAGACCTGC CAGCAAAAAT GATGGGAGGG
AAATTATTGC TTCATTTTGG AGCTGTAGAT TGGTCTTGTA GGGTGTATGT AAACGGAAAG
CTTGCAGGCG AGCATGCCGG GGGCTATGAT GCCTTTTCCT TCGACCTTAC TTCGCTGGTC
AGAAAGGGTG TTAAACAGAA TATTTCCGTA CAGGTCTGGG ATCCTACAGA TGATGGACCA
CAGCCACGGG GCAAACAGGT TAAACAACCC AAAGGTATTT GGTATACACC TGTTACAGGG
ATATGGCAAA CCGTATGGCT GGAAAATGTA CCTCAAACTT ATATTGTAGC TACCAAACAA
ACGCCTGATA TTGATAAAAA ACAATTGGCT GTTCGGGTAG AAGTTGCTGA TTTACAATCG
GGCGATCAGC TGGAAGTTAC TGCCTGGGAG GGTGCCAAGC GGGTTGCTTT ACAGGCCGGT
GATCCGCAAA GAGAATTGAT ACTGAACATT CCTGATCCCA GGTTATGGTC ACCGGAATCG
CCATTTCTAT ATGATCTGAA AGTAGCGGTT AAGAGAAAAG GGAAAACGAT TGATGAGGTT
GCGTCCTATT TTGGAATGCG TAAATCTGCT ATGGCTAAGG ATGCCGCCGG CATACAAAGG
ATGACGCTGA ACAATCAGTT TGTATTTCAA TACGGGCCTT TAGATCAGGG CTGGTGGCCG
GATGGTTTAT ACACGGCCCC AACAGATGAA GCATTAAAAT TTGATATCGA AAAAACGAAG
GCTTTGGGAT TTAATATGAT CCGGAAGCAT GTTAAAGTAG AGCCGGCCAG ATGGTATTAC
CATTGCGATA AAATGGGCAT GCTGGTATGG CAGGATATGC CAAGCGGCGA TACCGGAGGA
AATGTATGGG ATGCGAAACC TGGTTTTATC ACCGGCGGCA AGCTGGATAA GGACCGTAGC
CCGGAATCGG AAAATATTTT CAGAAAGGAG TGGAAAGCCA TTATGGATCA GTGCTATAAT
TATCCGAGCA TTGTTTCCTG GGTTCCTTTT AACGAAGCAT GGGGCCAATT TAAAACCAAA
GAAATTGTAG ACTGGACGAT GAAATATGAT CCATCGCGCC TGGTAAATGC AGCGAGTGGC
GGAAATTATT TTATGGGCGC AGGACAGGTG CTCGACCTCC ACATTTATCC GGCACCTGCG
ATGCCTGATC CTGCAATTTT TGGTGCCCGG CAAGCTTTGG TGTTGGGTGA ATTTGGTGGA
TTGGGGCTGC CGATTGAGGG GCATACCTGG CTGGACAAGG GCAATTGGGG ATACCAGAGT
TATAAAAACA AGGAGGATCT GTTTGCACAG TATACCAAGT TTATCAGCGC TATTCCTAAA
TTGATCCGTT CGGGCTTATC TGCTGCGGTT TATACCCAGA CAACGGATGT GGAAATAGAA
ACCAATGGCC TGTTTACGTA TGATAGAAAA GTGTTAAAAA TGCCTTTGGA TGGAATGTAT
CAGCTGCATC GCCAGTTATA CGATCCATCG CTTGTTAAAT GGTAA
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| Protein sequence | MTRLNLSLLL LLMVHFAHAQ WKPVPGKIST DWAAKVNPSN PLPEYPRPQL VRKSWINLNG
LWQYAILPKG SDKIPVSYAG QILVPYAVES SLSGVGKMVG ENNVLWYNRS IDLPAKMMGG
KLLLHFGAVD WSCRVYVNGK LAGEHAGGYD AFSFDLTSLV RKGVKQNISV QVWDPTDDGP
QPRGKQVKQP KGIWYTPVTG IWQTVWLENV PQTYIVATKQ TPDIDKKQLA VRVEVADLQS
GDQLEVTAWE GAKRVALQAG DPQRELILNI PDPRLWSPES PFLYDLKVAV KRKGKTIDEV
ASYFGMRKSA MAKDAAGIQR MTLNNQFVFQ YGPLDQGWWP DGLYTAPTDE ALKFDIEKTK
ALGFNMIRKH VKVEPARWYY HCDKMGMLVW QDMPSGDTGG NVWDAKPGFI TGGKLDKDRS
PESENIFRKE WKAIMDQCYN YPSIVSWVPF NEAWGQFKTK EIVDWTMKYD PSRLVNAASG
GNYFMGAGQV LDLHIYPAPA MPDPAIFGAR QALVLGEFGG LGLPIEGHTW LDKGNWGYQS
YKNKEDLFAQ YTKFISAIPK LIRSGLSAAV YTQTTDVEIE TNGLFTYDRK VLKMPLDGMY
QLHRQLYDPS LVKW
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