Gene Phep_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0083 
SymbolmetG 
ID8251167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp91617 
End bp93725 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content44% 
IMG OID644933732 
Productmethionyl-tRNA synthetase 
Protein accessionYP_003090371 
Protein GI255529999 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.158203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATAACA GTAAAATAAA AAGATATACG GTAACCGCCG CGCTTCCTTA TACCAATGGA 
CCGGTACATA TCGGGCATTT GGCAGGTGTT TATTTACCTG CAGATACCTA TGTGAGGTAC
CTGCGCTCTA ATAAAAGGGA TGTAAAGTTT ATTTGCGGCT CTGACGAAAA TGGGGTACCC
ATTACCCTCA AGGCCAAAAA AGAAGGGGTA ACCCCCCAGG TTATTGTAGA TAAATACCAT
AAGATCATTG GTGATTCTTT TAAAGAATTT GGTGTTTCTT TTGATATTTA TCACCGCACA
TCATCACTGA TGCACCACCA GACTGCATCC GACTTTTTTG AGACCCTTTA TAACAAAGGG
GTTTTTACTG AAGAGGTTAC CGAACAGTAT TATGATGAAA AGGCACAGAC GTTTCTGGCC
GATCGCTACA TTACCGGTAC CTGCCCGAAA TGTGGCAATG AAAATGCTTA TGGCGATCAG
TGCGAAAACT GCGGCAGTAC GTTAAATGCA ACTGATCTGA TCAATCCGAA GTCGACATTA
TCAGGTGAGC CACCTGTAAG AAAGGAAACC AGGAACTGGT TTTTGCCATT GGATAAATAT
GAAGAGCAGT TAAGAAAATA TATTGACGGA CATAAAGAAT GGAAGCCAAA TGTATTTGGG
CAATGCCAAT CCTGGTTAAA CGCAGGTTTA CAGCCCAGGG CGATGACCCG TGATCTGGAC
TGGGGCGTAA AGGTGCCATT AAAGGATGCG GAAGGGAAAG TACTTTATGT TTGGTTTGAC
GCCCCTATTG GCTACATTTC AGCAACAAAG GAACTCTTTG AATATGCCCG TCTGGATGTG
TGGAACCCAA AGGCCGAAGA ATATTATATC AACCAGAGTG AGGTAGAAAA AGGCAGCTGG
GAAGATTACT GGAAAGATGA AGAAGCCAAA CTGGTGCACT TTATAGGAAA AGACAATATC
GTTTTTCATT GCATCATATT TCCGGCAATG TTAATGGCGC ATGGCGATTA CATTTTAGCA
GATAATGTAC CGGCCAATGA ATTTTTAAAC CTGGAAGGGC AGAAAATATC TACTTCTAAA
AACTGGGCCG TATGGTTAAA TGAATATCTG GAAGAGTTTA AGGATAAACA GGATGTATTG
CGCTACGTAT TAACGGCCAC GGCTCCTGAA ACAAAAGATA ACGATTTTAC CTGGAAAGAT
TTTCAGGCCA GGAACAACAA TGAACTGGTT GCCATATTGG GCAATTTTGT AAACCGGGTG
GTGGTACTGA CGCACAAGTA CTTTAAGGGT AAGGTGCCAA TGTGTATGCA CATTACACCG
GAAGACCAGC AGGTAATGGA TGAGCTGGCT GCAGCCCCGG CAAAAATCAG CGCATCGATA
GAGAATTACC GTTTCAGGGA AGCGTTGGGT GAGGTAATGA ATGTTGCACG CTTGGGCAAT
AAATACCTGG CAGACACAGA GCCTTGGAAA GTGATTAAAA CGGATGAGGA CAGGGTGCGT
ACGATTTTGA ACATCAGTTT ACAGATCGCT GCCAATTTAG AAATACTGAT TGAGCCGTTC
CTGCCGTTTA CAGCGGATAA GCTGATGAAA ATGCTGAACT ATGGTGGGCA TACCTGGGAA
TCGGCAGGTA ACGTAAATTT ACTGCATAGG GGCCATCAGC TGAATGAGCC GGTATTGCTG
TTTGAAAAAA TTGAAGATGA GGCCGTACAG GCCCAGATAG ATAAACTGAA CAGGAGCAAA
GCGGACAATA CTGCTGCTGC TGCGGTTACA GCACCGGCAA AAGAAAACAT TCAGTTTGAA
CAGTTTACAG CCGTTGATAT CAGAGTTGCC ACGATAATTG CGGCAGAGAA GGTAGAAAAA
ACCAAAAAGT TGCTAAAACT AACACTGGAT ACTGGAATAG ACCAGCGTAC AGTGGTTTCT
GGTATAGCCG AATTTTATAA GCCAGAAGAT GTGATTGGGC AACAGGTTAG CCTTGTGGTC
AATCTGGCAC CGAGAGAGAT CAAGGGGATT GTTTCACAGG GAATGATCCT GATGTCGGAA
GATGCAGAGG GGAAGCTGGC GTTTGTGGCG CCGGTAGTTA AGCATAATAA CGGTAGTGTG
ATCAGGTAA
 
Protein sequence
MDNSKIKRYT VTAALPYTNG PVHIGHLAGV YLPADTYVRY LRSNKRDVKF ICGSDENGVP 
ITLKAKKEGV TPQVIVDKYH KIIGDSFKEF GVSFDIYHRT SSLMHHQTAS DFFETLYNKG
VFTEEVTEQY YDEKAQTFLA DRYITGTCPK CGNENAYGDQ CENCGSTLNA TDLINPKSTL
SGEPPVRKET RNWFLPLDKY EEQLRKYIDG HKEWKPNVFG QCQSWLNAGL QPRAMTRDLD
WGVKVPLKDA EGKVLYVWFD APIGYISATK ELFEYARLDV WNPKAEEYYI NQSEVEKGSW
EDYWKDEEAK LVHFIGKDNI VFHCIIFPAM LMAHGDYILA DNVPANEFLN LEGQKISTSK
NWAVWLNEYL EEFKDKQDVL RYVLTATAPE TKDNDFTWKD FQARNNNELV AILGNFVNRV
VVLTHKYFKG KVPMCMHITP EDQQVMDELA AAPAKISASI ENYRFREALG EVMNVARLGN
KYLADTEPWK VIKTDEDRVR TILNISLQIA ANLEILIEPF LPFTADKLMK MLNYGGHTWE
SAGNVNLLHR GHQLNEPVLL FEKIEDEAVQ AQIDKLNRSK ADNTAAAAVT APAKENIQFE
QFTAVDIRVA TIIAAEKVEK TKKLLKLTLD TGIDQRTVVS GIAEFYKPED VIGQQVSLVV
NLAPREIKGI VSQGMILMSE DAEGKLAFVA PVVKHNNGSV IR