| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0080 |
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| Symbol | |
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| ID | 8251164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 85990 |
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| End bp | 89112 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644933729 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003090368 |
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| Protein GI | 255529996 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TTCTACAAAG TTTGTTCATT TTTGTGTTCG TTGCAGGAGC AGCTATGGCA
CAAGATCGGA CAATTACTGG TACGGTTACA GGAAAGGACG ACGGATTGCC GGTTCCTGGA
GTTTCCGTAA AAATTGTTGG TACACAGAAT GGTACTTCAA CAGATGCAAA TGGTAAGTAC
GCCCTCAAAA TTTCTTCGGG TGCAGCTTCA ATCGAATTCT CTTCAATTGG TTATTTAACA
CAAACCATTG CTGTCGGCTC TGGTAATGTG GTAAATGCAG CTTTAGCTAC TGATGCGCAG
CAACTGGGCG AGGTGGTAGT TACAGCTTTG GGTATTTCCA GGGAGAAAAA ATCGTTGGGA
TATAGTGCAA CCACACTTAA GTCTGAAGAC CTGACCAAGG CAAGAGAAAC AAATGTTTTG
AACTCTTTAG CTGGTAAAGC AGCAGGTGTA CGTGTAAATG CCCAATCTGG AACGCTTGGC
GGAGCTTCAA AAGTAGTAAT CAGGGGTGTA AACTCTTTAG ATGGCGGTTA TCCATTGTAC
GTTATTGATG GTTTAACTGT TACAGAATCT AATGCTGTTG GTGGAACAAC GGCAACCAAC
GTCGATTTTG GTAACCGTAT TGGTGATTTA AGCTCTGATG ACATTGAATC GATGACTGTG
TTAAAAGGTG CTGCAGCAAC AGCATTGTAC GGAGCCAGAG CAAGAGATGG TGCGATCATC
ATTACTACTA AACGTGGAAA AAAAGGAGCT CCAAGCTCTA TTGATATCAA TTCTTCGTTT
CGCTTTGAAA ACCCATTGGT GTTGCCTGAA CTTCAGAATG AATATGCTCA GGGAAATAAA
GGAGTGTACC AGTTAACTGC AACAAACGGA TGGGGACCTA GAATTTCAGA TGTTCAAAAT
CAGACATTCC CTAACTTTTT AGGAAATCAG GTGACATTGC AGGCCTATCC TGATAATGTG
AAAGACTTTT TTAATACAGG TACAGCAATC ATGAACAATA TTTCGTTTGC TGGTGCCGGA
GACAATTCTG ACTACAGGGT TAGTTTTTCA AGTGCAAATG AAAAAGGAAT CATTCCTCAA
TCCACATTAG ACAGGTATAC ACTTTCTTTA AATGCAGGAA AAGAATTTAG TCCGAAACTT
TCATCAAGGT TTACCGGTTC ATATACCAAT CTTAAAGCTG ATGGAAGACC TGCACAAAGT
TCAAATAATA CCAACGCAAT TGTTTCTACT ATTTATGGCC TGCCCAGAAC TATTGATATC
AATTTGCTGA AAAATAATTT TGAGGATAAA GAAGCAGGTA CCCAGATCTT TTTAAGTCCT
AACCGTAATG GTAATAACCC TTACTGGGTG ATGGAGTATA ACAGGAACAG CAACTCTGTA
GATCGTTTTA CCGGAACTTA TAACCTTACT TATAAACCTT TAGACTGGAT TACCATCAGC
AACAACTTTG GTGCTGATAT ATATACAGAA AAACGCCAGC TCTTGGTGAG AAAAGGTACT
GCAGGTTTTC TGCAAGGTAA ATTTACCAAT TTTGACCTGC TGAGTAAACA GATTAACGAC
GATTTAATTG CCACTTTAGA ACAGAATAAC CTGGTAAAAG ATTTTAAATT TAAACTGATT
GTGGGTGGTA ACATTAACCA GCGTTTAAAT CAAAGCACCA ATATTGAGGC TGTTGGTTTA
ACCGTTGATC AGTTATACAA CTATACCAAT GCTTCCAGTA AAAACCCGAC TTCAATTTAT
ACACAAAGAA GATTGCTGGG TTTGTATAGC GCCTTAAGTG TGAACTATAA AGATTACTTA
TACCTGGATG TAACGGGTAG AAATGACTGG ACATCTACAC TTCCTATCGC AAACAGATCA
TACTTTTACC CATCAGTGAG CGGAGCATTT ATTTTCTCTG AATTGTTGAA AGATAAAAAT
ATGGATTGGT TAAGCTATGG AAAAATCAGG GCCAGCTGGG CGTCAGTAGG TAGTGATTTG
GAGGCATATA AACTGGATTA TCAGTATGAC CCGATTTCAA CAGTATTCTT ACAGTATGTT
TCTTCTACCG CAGTAGTTTT TCCTGCCGGA CCAATTTCGA CAGCGTTTAC TGCGCCTAAA
ATATTACCAA ATCCAGAGCT AAAACCACAG AAACAAAATT CTTATGAGCT GGGTACAGAG
TTGAAATTTT TACATAACCG CATTGGTATT GACTTTGCTT TTTACAATAA CTTAACAAAA
GATCAGCTGA TCCCAATCGA TGTACCTATT GCAACAGGAT ATTTTGCCAA ATATGTTAAT
GCGGGTGCAA TCAGAAATAA GGGTATTGAG GTGGCTTTAA ATCTGGTTCC GGTAAAAACT
AAGGATTTTG ACTGGAATAT TGATTTCAAT TTTGGAAAGA ACAAACAGAC TGTTGATGAA
CTGGCGCCTG GATTGATACA ATACAGTCTT GCCAGCGGTT ATAGTGGATT GTCAATTAAA
GCCGAAGTTG GTGAGCCTTT TGGCTTATAT GGCTCTAAAT GGTTAAGAGA TGACAATGGT
AATTTTATAA TTGATGAAGA TAATGGCCAA AAGATTGCTA AAACAAACCA GCGTTTGGGT
AATATTTATG CCGACTGGAC TTTGGGTATC AATAACAGTT TTAATTATAA AGGGTTTAAC
CTTAGTGCAT TGATCGATAT TCGTAAAGGC GGTGTGTTTT ATTCTGGAAC TGTGGCCAAT
TTACGTGGTG GTGGTTTAGC AAAAGAAACC GGTGGCGACA GGGCTCCTAT TGTAGTTCCT
GGTGTTAACC TGGTAAGTCC CGGACAGTAC AAGCCGAACA CTACTCCAAT GACCGCTCAG
GATTATTGGG TCTGGGAATC GAGTACAACC AATACAGAAG GTAATGTTTT TGATGCCGGT
TTTGTTAAGC TAAGGGAAGT AAGTTTATCT TATGTCATTC CATCCAAAGT ATTTAAATCA
GGATTTATCA GAGGTATTCA GCTGGGTGTT GAAGGGAGAA ACTTATGGTT AATTAAAAGC
CATGTGCCTC ATGTTGATCC TGAGCTTAAC TTTTTTGGTG CAGGTAGTGT TGGGGAAGGT
GTTGAATTCA ACAGTATTCC TACAACCAGA TCGTTTGGTA TGAATTTAAG GTTGACCTTG
TAA
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| Protein sequence | MKKLLQSLFI FVFVAGAAMA QDRTITGTVT GKDDGLPVPG VSVKIVGTQN GTSTDANGKY
ALKISSGAAS IEFSSIGYLT QTIAVGSGNV VNAALATDAQ QLGEVVVTAL GISREKKSLG
YSATTLKSED LTKARETNVL NSLAGKAAGV RVNAQSGTLG GASKVVIRGV NSLDGGYPLY
VIDGLTVTES NAVGGTTATN VDFGNRIGDL SSDDIESMTV LKGAAATALY GARARDGAII
ITTKRGKKGA PSSIDINSSF RFENPLVLPE LQNEYAQGNK GVYQLTATNG WGPRISDVQN
QTFPNFLGNQ VTLQAYPDNV KDFFNTGTAI MNNISFAGAG DNSDYRVSFS SANEKGIIPQ
STLDRYTLSL NAGKEFSPKL SSRFTGSYTN LKADGRPAQS SNNTNAIVST IYGLPRTIDI
NLLKNNFEDK EAGTQIFLSP NRNGNNPYWV MEYNRNSNSV DRFTGTYNLT YKPLDWITIS
NNFGADIYTE KRQLLVRKGT AGFLQGKFTN FDLLSKQIND DLIATLEQNN LVKDFKFKLI
VGGNINQRLN QSTNIEAVGL TVDQLYNYTN ASSKNPTSIY TQRRLLGLYS ALSVNYKDYL
YLDVTGRNDW TSTLPIANRS YFYPSVSGAF IFSELLKDKN MDWLSYGKIR ASWASVGSDL
EAYKLDYQYD PISTVFLQYV SSTAVVFPAG PISTAFTAPK ILPNPELKPQ KQNSYELGTE
LKFLHNRIGI DFAFYNNLTK DQLIPIDVPI ATGYFAKYVN AGAIRNKGIE VALNLVPVKT
KDFDWNIDFN FGKNKQTVDE LAPGLIQYSL ASGYSGLSIK AEVGEPFGLY GSKWLRDDNG
NFIIDEDNGQ KIAKTNQRLG NIYADWTLGI NNSFNYKGFN LSALIDIRKG GVFYSGTVAN
LRGGGLAKET GGDRAPIVVP GVNLVSPGQY KPNTTPMTAQ DYWVWESSTT NTEGNVFDAG
FVKLREVSLS YVIPSKVFKS GFIRGIQLGV EGRNLWLIKS HVPHVDPELN FFGAGSVGEG
VEFNSIPTTR SFGMNLRLTL
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