| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0078 |
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| Symbol | |
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| ID | 8251162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 81609 |
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| End bp | 82910 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933727 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_003090366 |
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| Protein GI | 255529994 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGCA TAGGCTCCCT ATATCAGCAT TACCTCAACC ACAGCACTGT ATGTACTGAT
ACAAGGAATA TTGTACCTGG TTGTCTTTTT TTTGCCCTTA AAGGCGAAAA ATTTGATGCC
AACACCTTTG CAGAAGAGGC CCTGAAGCTT GGTGCAGCAT ACAGCATCAT CGATAATGAA
GCTTATCAAA CCAATGAGCG TTGCCTGCTG GTTAGCGATG TACTGACCGC CCTGCAGGAC
CTGGCCAGGC ATCACCGTTC GCAACTCCAT ATCCCCGTGG TTGGCCTTAC AGGTAGTAAT
GGCAAAACCA CCACGAAGGA ACTGATCAAT GCCGTGCTTT CCCGCAAATA CAAAACCTTT
GCCACCAGGG GCAATCTGAA TAACCATATC GGGGTTCCGC TTTCTATCCT GTCCCTTGGA
CCCGAAATAG AAATGGCTGT GATAGAAATG GGTGCCAATC ATCAAAAGGA GATTGAATTT
CTTTGTGGCA TAGCCCAGCC TACACATGGC CTGATCACCA ATATTGGCAT GGCCCATTTG
GACGGATTTG GCGGCTTTGA AGGGGTAAAA AAGGGGAAAG CAGAACTGTT TGCTTACCTG
AAGCAGCATT CGGGTTTTGC GTTCATCAAC CGCAACAACC CTTATTTATT AGAGATGAGC
GAAAAAGCGC AATTGAGCAA AGTTGTTTAT TATGGTACTG AAAGCAGCAA TACGGTAGCT
GGAAAGCTCT TAAAAACAGA TCCCTTTATT GAACTTTCCT GGCAAAGCAA GGCCGGCGAA
TTCTACATCG CCTTAAACTT AACCGGTGCT TATAACTTTG AAAATATCCT TGCTGCCGTA
TGTATCGGCC AGTTTTTTGA AGTAAGCCCG GTAGAGATCA ATGCCGGCCT GTCGGGCTAT
TTCCCCAACA ACAACCGCTC ACAGTTAACC AAAACCGCCA GTAACACCGT GATCTGCGAT
TTTTACAATG CCAATCCAAG CAGTATGGCT GCAGCCTTAA CCAATATTGA ATTGTTAAAG
GGCAGCAACA AAACGGTGAT TATCGGAGAT ATGTTTGAAT TGGGGGAAGA ATCGGCCAAA
CAGCACCTGA ACATTATTGA ACAGGCAGAA AAGCTAGATA TTGCTACGCT TATTTTTATT
GGAAAACACT TTTACCATGC GAAACAAAAC CACAAGGGCC ATTTTTTTGC CACCCCGGCA
GAGGCAGCTG CATTTTTGAA AACAAACCCG CTAAAAAATG CCCTGATCTT ACTTAAAGGG
TCGCGTGGAA TGGCATTGGA GCAACTGATG CCCTTGCTTT AA
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| Protein sequence | MTSIGSLYQH YLNHSTVCTD TRNIVPGCLF FALKGEKFDA NTFAEEALKL GAAYSIIDNE
AYQTNERCLL VSDVLTALQD LARHHRSQLH IPVVGLTGSN GKTTTKELIN AVLSRKYKTF
ATRGNLNNHI GVPLSILSLG PEIEMAVIEM GANHQKEIEF LCGIAQPTHG LITNIGMAHL
DGFGGFEGVK KGKAELFAYL KQHSGFAFIN RNNPYLLEMS EKAQLSKVVY YGTESSNTVA
GKLLKTDPFI ELSWQSKAGE FYIALNLTGA YNFENILAAV CIGQFFEVSP VEINAGLSGY
FPNNNRSQLT KTASNTVICD FYNANPSSMA AALTNIELLK GSNKTVIIGD MFELGEESAK
QHLNIIEQAE KLDIATLIFI GKHFYHAKQN HKGHFFATPA EAAAFLKTNP LKNALILLKG
SRGMALEQLM PLL
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