Gene Phep_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0075 
Symbol 
ID8251159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp78603 
End bp79751 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content43% 
IMG OID644933724 
ProductDNA polymerase III gamma/tau subunit 
Protein accessionYP_003090363 
Protein GI255529991 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTTA AAGAGATCAC CGGTCAGGAA AACGTAAAGC AGCAATTGTT ACAAACAGTT 
GCAGAGAACA GGATCAGTCA TGCCCAGTTG TTTTTGTCGT GCGATGGCAG CGGGGCTTTG
CCACTTGCTA TCGCCTATGC ACAGTACATC AATTGTTTAG ACAAACAGGA AAACGACAGT
TGCGGGCTTT GTTCATCCTG CCGTAAGTAC GAAAGGTATA TTCATCCCGA TCTGCATTTT
TCCTATCCTT TTTTTGCTTC CAAAGATGTA AAAACAGCAG TTGATGTGCT GGAAGAGTGG
AGGAGCATGC TCCTGGCCGA TGCTTATTTT GATATAGACA TCTGGCGATC TAAATTAAAT
GCCGAGAACA AACAGGCCAA TATCAACATT GCAGAATGTC ATGATATCAT AAAAAAATTA
AGCTATAAAG CATTTGAGGC CCATACCAAG GTGCTCATTA TGTGGCTGCC CGAATACCTG
GATAAAGAAG GGAACGCCTT ATTAAAAATT ATTGAAGAAC CGCCGCAAAA CACACTGTTC
ATTTTGGTGG CCAATAACCA GGAACAAATC CTTTCTACTT TGCTGTCGCG CACACAGATT
GTGAAAATAC CAAAGCTTTC TCATGCTACC GTAGAAAACT ATTTAATGGA AGCACATGGC
TTACCCGAAA ACCAGGCTAC AGAATATAGC TTCCTGGCCG ATGGAAACCT GATAGAGGCC
AAATCGCTGG TAGCGAATAT CCATAACGAC AATGCAGATA AGTTTGCCGA CTGGCTGCGG
ATGGGTTATG GCAACCGGGT GCTCGATCTG GCTGCTTTTA CTGAGCAGGC CGCTGGCTGG
GGAAGAGAAA ACCAAAAGAA TTTTTTAAAG TACGGCATCA GCTTTCTGAG GGAATGCAGC
TTGTTGCTGA CTGGGGCCGA TGACCTGGTA AAACTGCCTT CAAGGGTACT TGAAACCGCG
AAAAAGCTGG CTACCCATGT GCTCGACCTG AATATGGCGG ATGCCATTAT CTCGGAACTG
GAGCAGGCGC ATTATCACAT TGAACGAAAT GCAAATCCTA AAATTCTGTT TTTAGATGTA
TCTTTACAAT TGGTAAAAAT AATTAAGTTT AAAACGCTCC CGAAAGGGAC TCAATATATA
TACAATTAA
 
Protein sequence
MQFKEITGQE NVKQQLLQTV AENRISHAQL FLSCDGSGAL PLAIAYAQYI NCLDKQENDS 
CGLCSSCRKY ERYIHPDLHF SYPFFASKDV KTAVDVLEEW RSMLLADAYF DIDIWRSKLN
AENKQANINI AECHDIIKKL SYKAFEAHTK VLIMWLPEYL DKEGNALLKI IEEPPQNTLF
ILVANNQEQI LSTLLSRTQI VKIPKLSHAT VENYLMEAHG LPENQATEYS FLADGNLIEA
KSLVANIHND NADKFADWLR MGYGNRVLDL AAFTEQAAGW GRENQKNFLK YGISFLRECS
LLLTGADDLV KLPSRVLETA KKLATHVLDL NMADAIISEL EQAHYHIERN ANPKILFLDV
SLQLVKIIKF KTLPKGTQYI YN