| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0063 |
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| Symbol | |
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| ID | 8251147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 68246 |
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| End bp | 68878 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644933712 |
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| Product | hypothetical protein |
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| Protein accession | YP_003090351 |
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| Protein GI | 255529979 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAAAAC AGCAAATAAA AACAATAAGA TTCAATAATA TGCAATTAAA AAGAACAATG
ACCATTGCGG CTATAGCCGT TTCCGGAATG ATAATCAGCT CATGTTCGCG ACAAGTTACC
CGGGTAAACA CAGACCAGGC CATTGATGTA AGCGGCAACT GGAACAATAC CGATTCCAGG
CTTGTGGCCG AAGAAATGAC CCAGACAGTT TTAGGTGGCA AATGGTTATC TACCCATCTG
GAAGAGAAGC AGGGCAAAAG ACCGGTTGTA GTGGTTGGTG TGGTAAAAAA TAAAAGCCAT
GAACATATCG ATGCCGAAAC CTTTGTTAAA GACGTAGAGC AGGCTTTTAT TAAAAGCGAA
CGTGTACGCC TGGTGCAGGG TGGCAAGAAA AGAGAGGAGC TGCGTGCCGA AAAAGCCGAT
CAGCAGGACA ACGCCACAGT ATCTACCATG AAAAAGTTTG GCCTGGAAAA TGGTGCAGAT
TACATTTTAC AAGGTTCCAT AAATTCTATC GTAGATTCCC ATAAGCGTAA AAAGGTGGTG
TATTATCAGG TAAACCTGGA GCTTACAGAT ATCCAGACCA ATGAAGTGGT ATGGATTGGG
GATAAGAAAA TAGCTAAATA CGTTAAAAAT TAG
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| Protein sequence | MVKQQIKTIR FNNMQLKRTM TIAAIAVSGM IISSCSRQVT RVNTDQAIDV SGNWNNTDSR
LVAEEMTQTV LGGKWLSTHL EEKQGKRPVV VVGVVKNKSH EHIDAETFVK DVEQAFIKSE
RVRLVQGGKK REELRAEKAD QQDNATVSTM KKFGLENGAD YILQGSINSI VDSHKRKKVV
YYQVNLELTD IQTNEVVWIG DKKIAKYVKN
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