Gene Phep_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0059 
Symbol 
ID8251143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp65273 
End bp66277 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content45% 
IMG OID644933708 
ProductFecR protein 
Protein accessionYP_003090347 
Protein GI255529975 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACC CTAAACACGA CACGTACAAA ACCGCTGATT TTCTGGATGA TATTTCCTTT 
ATAAATGCCA TAAAGCATCA TAAAGAACGT GATCTTAGTT ACTGGAAAGA ATGGAAAAGT
TCCGGCCCAT CGAATCTGCA GGCCTATGAG GCTGCCGAAC TGCAGCTGCG GTTGATCCTG
TCGTCCCGAC GGCTAAAGCC CGGAAGTGTA TTTATGGAAA GTTTGTGGGA AGACATCAAC
GGAAGTATTG AAACTGAGCA CCGGCATAAA CTGCGAAAAA TACAGATGGC CATTCTTTCG
GCTGCAGCAG TGCTGGCGCT GATGCTGCTC TCGGCTTCGT TATGGTTTTT CAATTCCAGC
ATTACGCTGC GCACACCTTA CGGAAAAACA CAGCAGGTTT TTCTGCCCGA CGGGAGCCAG
GTCCTGCTAA ACGCCAACAC AGAACTCCGG TACCCGAGGG CTTATAACTG GAAAAATACC
AGGGAAGTTT TCTTAAAAGG GGAAGCCTAT TTTAAGGTAA GCCATGGAAG CCCCTTTAGT
GCACATACAA AAAACCTGAC AGTACAGGTG CTGGGAACAG AGTTTAACAT CAAAGAAAGG
CGGGGAACAA CACTGGTTGC CCTCATCAGG GGTAGGGTAG CCATAAAAGG ATCTGCCATT
AACCCTTTAA AACCTTCGAT TTTGAATCCT GCTGAGCTTT TTCGTTTTGA TGAAAACACA
AATACAGCTG TAAAAACAAC AACAAATCCC CAGGTTTATA CCGCCTGGAT GGACCATAAA
GTAATTGCCG AAAACACAAC TGTTGGCAGC ATCATTAAGG ATTTTGAAGA CTTGTATGGC
AGCAGGATCA TTCTTGAGGA TACCACTTTG TATAACCGTG TTATTGATGG GGTGGTACCC
ATGGGCGATA AAGACAATAC CCTTTTTGTA ATTGCAAATA TCCTGAACGT ACAGATCAGG
AAACAAGGCG ACACCATTTT GTTTAAACCG CGCAAAACAC CATAA
 
Protein sequence
MINPKHDTYK TADFLDDISF INAIKHHKER DLSYWKEWKS SGPSNLQAYE AAELQLRLIL 
SSRRLKPGSV FMESLWEDIN GSIETEHRHK LRKIQMAILS AAAVLALMLL SASLWFFNSS
ITLRTPYGKT QQVFLPDGSQ VLLNANTELR YPRAYNWKNT REVFLKGEAY FKVSHGSPFS
AHTKNLTVQV LGTEFNIKER RGTTLVALIR GRVAIKGSAI NPLKPSILNP AELFRFDENT
NTAVKTTTNP QVYTAWMDHK VIAENTTVGS IIKDFEDLYG SRIILEDTTL YNRVIDGVVP
MGDKDNTLFV IANILNVQIR KQGDTILFKP RKTP