Gene Phep_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0055 
Symbol 
ID8251139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp56092 
End bp57375 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content44% 
IMG OID644933704 
Producthypothetical protein 
Protein accessionYP_003090343 
Protein GI255529971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.337391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGG AAGATGACGG GCTGATTGCC CATATAAGGG AAAGTTTGAC GGAACACGAG 
GAGGCCTATA ATCCTGGTGC ATGGGAGCGC TTTGAAAAGA AAGAGCGTAA AGGGAAAGGT
CTGCTTTGGC TAACAAGTTT AGCTGCGGCA GCAGTGGCCC TGATGATTGG TTTTGCTTTA
TTTTATACCA GCCATAAAAC ACTGCATAAA AACCCGGACC TGTATACTAA AATCAGTAAG
CCGGTACAGG ATACTATCGC TGTGTTGCCG GTCCCGGCAA AAGAAACAGC AGCTGCTCAT
GGCATAGCCG AAAGACTGAA TACTGGAGTT GCACATAACC AGGCGGTAAC TAAACAACGC
AGCAACAATA ACATCAGCAG CAGTCCTTTA ATTGTGAATA CACAACAGCC TGTGGCACCG
ATTAGCGCTG TAAGCCCCGT AAAAGAGCCG GCCGTTCAGG AGCCTAAAAC AAGTACAGCA
CCTGTTGCGG TGACTATTGA GAAAAAAGAG GTTATTGTAA CTGCTGCAGA TTCGGGAGTT
GTGGCTAAAA CCCAGGAAAA GACAAATAAG CCACTTAGTT TTCAGGAGTT TCTGAACGCA
GAAGTAAAGA CCAACCCGCA GGTTGCCCAA ACAAAATCGG TCGCCAAAAA GAGCGATAAA
TGGGAAATGG GAGTTGTTGT GGCCCCGTCT ATAGGCAACG GTAAAAAACT GAACATGGGT
TATGGTGTAA GCATGGCTTA TGCATTGTCC AATAAAGTAT CTATCAGTTC TGGAATTTCT
TACAGTGAAA TGGGCGCATC TAAAGACCTC ACAAATAATG GTGAAAGAGC ATTTAACAGT
CCCGGTCCGG CCTCGGCAAT GGTTAGGGAA ACAAAAAGCC TGCAATCTGT TGATGCCAAC
CTGGTAGGAC TGGATATCCC GATAGAGATC AAATATTACT TCAATAAAAA ATTCTATACC
AATGTCGGGC TCTCTGCCTT TGCCGTATTA AGCCAGAAAC AAAGTAACAA TTACCTGCAG
GGGGTGGTAG AAAATGACCT GAGCAACCAA TCGGGGTTTT CGGCTGTTTA TACCACGAAA
AGTGTTTCTG AGGCAGTTCC ATCGGCTGAA GTGAGGAACG ACAAATATCT CGGCTTTTAC
AACATCTCCT TTGGCTATAA GCAAAAAATA TCCGACAAAC GTGCTTTTGC TGTAGAACCC
TTTCTGAAGC TGCCGGTAAA AGAATTTACA AAAGAAAACC TATACCTGCT GGGTACAGGT
ATAAGGTTAA AGTTTGATTT CTAA
 
Protein sequence
MKPEDDGLIA HIRESLTEHE EAYNPGAWER FEKKERKGKG LLWLTSLAAA AVALMIGFAL 
FYTSHKTLHK NPDLYTKISK PVQDTIAVLP VPAKETAAAH GIAERLNTGV AHNQAVTKQR
SNNNISSSPL IVNTQQPVAP ISAVSPVKEP AVQEPKTSTA PVAVTIEKKE VIVTAADSGV
VAKTQEKTNK PLSFQEFLNA EVKTNPQVAQ TKSVAKKSDK WEMGVVVAPS IGNGKKLNMG
YGVSMAYALS NKVSISSGIS YSEMGASKDL TNNGERAFNS PGPASAMVRE TKSLQSVDAN
LVGLDIPIEI KYYFNKKFYT NVGLSAFAVL SQKQSNNYLQ GVVENDLSNQ SGFSAVYTTK
SVSEAVPSAE VRNDKYLGFY NISFGYKQKI SDKRAFAVEP FLKLPVKEFT KENLYLLGTG
IRLKFDF