Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0055 |
Symbol | |
ID | 8251139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 56092 |
End bp | 57375 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644933704 |
Product | hypothetical protein |
Protein accession | YP_003090343 |
Protein GI | 255529971 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.337391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGG AAGATGACGG GCTGATTGCC CATATAAGGG AAAGTTTGAC GGAACACGAG GAGGCCTATA ATCCTGGTGC ATGGGAGCGC TTTGAAAAGA AAGAGCGTAA AGGGAAAGGT CTGCTTTGGC TAACAAGTTT AGCTGCGGCA GCAGTGGCCC TGATGATTGG TTTTGCTTTA TTTTATACCA GCCATAAAAC ACTGCATAAA AACCCGGACC TGTATACTAA AATCAGTAAG CCGGTACAGG ATACTATCGC TGTGTTGCCG GTCCCGGCAA AAGAAACAGC AGCTGCTCAT GGCATAGCCG AAAGACTGAA TACTGGAGTT GCACATAACC AGGCGGTAAC TAAACAACGC AGCAACAATA ACATCAGCAG CAGTCCTTTA ATTGTGAATA CACAACAGCC TGTGGCACCG ATTAGCGCTG TAAGCCCCGT AAAAGAGCCG GCCGTTCAGG AGCCTAAAAC AAGTACAGCA CCTGTTGCGG TGACTATTGA GAAAAAAGAG GTTATTGTAA CTGCTGCAGA TTCGGGAGTT GTGGCTAAAA CCCAGGAAAA GACAAATAAG CCACTTAGTT TTCAGGAGTT TCTGAACGCA GAAGTAAAGA CCAACCCGCA GGTTGCCCAA ACAAAATCGG TCGCCAAAAA GAGCGATAAA TGGGAAATGG GAGTTGTTGT GGCCCCGTCT ATAGGCAACG GTAAAAAACT GAACATGGGT TATGGTGTAA GCATGGCTTA TGCATTGTCC AATAAAGTAT CTATCAGTTC TGGAATTTCT TACAGTGAAA TGGGCGCATC TAAAGACCTC ACAAATAATG GTGAAAGAGC ATTTAACAGT CCCGGTCCGG CCTCGGCAAT GGTTAGGGAA ACAAAAAGCC TGCAATCTGT TGATGCCAAC CTGGTAGGAC TGGATATCCC GATAGAGATC AAATATTACT TCAATAAAAA ATTCTATACC AATGTCGGGC TCTCTGCCTT TGCCGTATTA AGCCAGAAAC AAAGTAACAA TTACCTGCAG GGGGTGGTAG AAAATGACCT GAGCAACCAA TCGGGGTTTT CGGCTGTTTA TACCACGAAA AGTGTTTCTG AGGCAGTTCC ATCGGCTGAA GTGAGGAACG ACAAATATCT CGGCTTTTAC AACATCTCCT TTGGCTATAA GCAAAAAATA TCCGACAAAC GTGCTTTTGC TGTAGAACCC TTTCTGAAGC TGCCGGTAAA AGAATTTACA AAAGAAAACC TATACCTGCT GGGTACAGGT ATAAGGTTAA AGTTTGATTT CTAA
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Protein sequence | MKPEDDGLIA HIRESLTEHE EAYNPGAWER FEKKERKGKG LLWLTSLAAA AVALMIGFAL FYTSHKTLHK NPDLYTKISK PVQDTIAVLP VPAKETAAAH GIAERLNTGV AHNQAVTKQR SNNNISSSPL IVNTQQPVAP ISAVSPVKEP AVQEPKTSTA PVAVTIEKKE VIVTAADSGV VAKTQEKTNK PLSFQEFLNA EVKTNPQVAQ TKSVAKKSDK WEMGVVVAPS IGNGKKLNMG YGVSMAYALS NKVSISSGIS YSEMGASKDL TNNGERAFNS PGPASAMVRE TKSLQSVDAN LVGLDIPIEI KYYFNKKFYT NVGLSAFAVL SQKQSNNYLQ GVVENDLSNQ SGFSAVYTTK SVSEAVPSAE VRNDKYLGFY NISFGYKQKI SDKRAFAVEP FLKLPVKEFT KENLYLLGTG IRLKFDF
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