| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0049 |
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| Symbol | |
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| ID | 8251133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 50107 |
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| End bp | 50667 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644933698 |
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| Product | peptide deformylase |
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| Protein accession | YP_003090337 |
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| Protein GI | 255529965 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.451864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTAC CCATTATAGC CTACGGTGAC CCGGTTTTAA AAAAAGTATG TACACCCATT
GAACAAACTT ACCCGGATCT GAAACAACTG ATCAGCAACA TGTTTGAAAC CATGTATAAC
GCGCACGGCG TTGGGTTGGC GGCACCGCAG GTGGGCCTGC CTATACGCCT GTTCATTGTA
GATACAGGGG CCGATGAGGG GGATAAGAAC AAGTTTAAAA AAGTATTCAT CAATGCCGAA
ATTCTGGAAG AAACAGGTGA GCCATGGGCA TTTAATGAAG GTTGCCTGAG TATTCCCGAC
ATCAGGGAAG ACGTTATGCG CAAGCCCAAT ATCCGTATTA AATATTACGA TGAGCACTGG
GAGCTGCATG AAGAAGAAGT AAGCGGAATG CCGGCAAGGG TAATACAGCA TGAATATGAC
CACATAGAGG GCAAGCTGTT TACAGATACT TTAAGCCTGC TGCGTAAAAC AATGCTTAAA
AGCAAGCTGG ATGCCATTTC TAAAGGAAAT GTAAAGGCCG ATTATAAGAT GCGCTTTCCG
AAACAAAGCA AAAAACGCTA G
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| Protein sequence | MKLPIIAYGD PVLKKVCTPI EQTYPDLKQL ISNMFETMYN AHGVGLAAPQ VGLPIRLFIV
DTGADEGDKN KFKKVFINAE ILEETGEPWA FNEGCLSIPD IREDVMRKPN IRIKYYDEHW
ELHEEEVSGM PARVIQHEYD HIEGKLFTDT LSLLRKTMLK SKLDAISKGN VKADYKMRFP
KQSKKR
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