| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0048 |
|---|
| Symbol | |
|---|
| ID | 8251132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 49469 |
|---|
| End bp | 50110 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644933697 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003090336 |
|---|
| Protein GI | 255529964 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.463125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATG CGCTGACCAT TTTATTGTTT CTTTTCGTTT CTCCGTTATT TGCGCAGCAA
AATACGACGG AGCGGCCATT GATCCAATTT ACAGGTATCA TTACCGATGT GGATAGCAAT
ACAGTGGTCC CTTACGTTAC GGTTACAAAT TTAACCAATA AGGGGCAGCG CTACGCTGCC
AATTATAAAG GGTATTTTTC TTTTATAGCC CATCCGGGCG ATACCCTACT GTATACTGCA
ATTGGGTACA AGGACCTGCT GTTGGCCATC CCTTCGCAGA TCAATGACAG TAAGTATACG
GCAATGGTCA AAATGAAAGC CGAGATTGTA AACCTGCCTA CCGTGCGTGT TTATCCCTGG
GCTACTGTTG AAGAGTTTAC CCGTGACTTC ATGTCGATGA AGATTGCAGA TGATGACTAT
GTCATTGCCG CCAGAAATCT TTCGCAGGAA AGTCTTAGCG GATTGATCCA AACCCTCCCA
AGGGATGGTG GTGAGATCCA GAGCATCAAC AACCGGCTTA ACCACGACCG GGCATTAAAT
AAGAATATGG TTCAGACCAA CCCACTTTTA AATCCTTTTG CCTGGGGCAA ACTCATGCAG
TCCATCTTTA AAGGAGATAA AGCCCGGAGT GAGAGCAACT AG
|
|---|
| Protein sequence | MKYALTILLF LFVSPLFAQQ NTTERPLIQF TGIITDVDSN TVVPYVTVTN LTNKGQRYAA
NYKGYFSFIA HPGDTLLYTA IGYKDLLLAI PSQINDSKYT AMVKMKAEIV NLPTVRVYPW
ATVEEFTRDF MSMKIADDDY VIAARNLSQE SLSGLIQTLP RDGGEIQSIN NRLNHDRALN
KNMVQTNPLL NPFAWGKLMQ SIFKGDKARS ESN
|
|---|
| |