Gene Phep_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0046 
Symbol 
ID8251130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp48020 
End bp49126 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content46% 
IMG OID644933695 
Productprotein of unknown function DUF59 
Protein accessionYP_003090334 
Protein GI255529962 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.261408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATTA GCCAAGAACA AGTTCTAGCC GCTTTAAGGA ATGTTGAAGA CCCAGATCTG 
AAGAAAGACC TGGTGACCCT AAACATGATC AAGGACTTAA AAATAGAAGA CAAACACATA
AGTTTTACCT TAGAACTGAC CACTCCGGCC TGTCCGATGA AGGATATGCT TAAAAATGCC
TGTTTAAATG CCATTAAGCA TTTTGTGAGC AGAGAGGCAG AAATAGAGAT CAACATTACC
TCGAGGGTAA CCAGACCTAT GGATACCACG CAGCTTAAGG CCATCCGGAA TATTATCCTG
GTCTCTTCAG GCAAAGGGGG GGTAGGAAAA TCAACTGTAG CCAGTAATCT GGCCATTGCA
CTGGGGGCCG ATGGGGCAAA AGTAGGGCTG ATAGACGCGG ATATTTATGG GCCTTCGGTA
CCAACTATGT TTGGCCTGGT TGGGGCAAAA CCAGGTGCAA GAGAAACAGC AGAGGGTAAA
ACGCTGATTA TACCTATCGA AAAATATGGC ATAAAACTAT TGTCTTTAGG CTTTTTTGCC
GATCCTGACC AGCCTGTGCC CTGGCGCGGA CCAATGGCTT CCAATGCGGT AAAGCAGCTG
TTTAATGATG CCGACTGGGG CGAGCTGGAC TACCTGATTG TAGACCTGCC ACCGGGGACG
GGCGATATCC ACATTACGAT TACCCAAAGT TTTCCTATTG CCGGGGCTGT AATTGTGACC
ACACCCCAGC AGGTAGCGCT TGCCGATACA CGAAAAGGGC TTGCCATGTT TAAAATGCCA
TCCATTAACA TCCCTGTATT GGGTGTAGTG GAAAATATGG CTTATTTTAC ACCGGCCGAG
CTGCCCGAAA ACAAATATTA TATTTTTGGA AAAGATGGCG GAAAAGAACT CGCAAAATCA
TTTGGTGTGC CTTTCCTGGG CGAAATCCCG ATTGTACAAA GCATTACTGA AGGGGGCGAT
AGCGGCGTTC CGGTAGCTAT GGATACACAC AACAGTGTGG CCCGGTCTTT TGCAGAAATT
GCAGGTAAAG TAGCCCAGCA AATTGCTATA AATAATGCCC AAAGTGCAGG TAATGTTTCC
CCTGTCGTAG AAATTGATAC GAATTGA
 
Protein sequence
MMISQEQVLA ALRNVEDPDL KKDLVTLNMI KDLKIEDKHI SFTLELTTPA CPMKDMLKNA 
CLNAIKHFVS REAEIEINIT SRVTRPMDTT QLKAIRNIIL VSSGKGGVGK STVASNLAIA
LGADGAKVGL IDADIYGPSV PTMFGLVGAK PGARETAEGK TLIIPIEKYG IKLLSLGFFA
DPDQPVPWRG PMASNAVKQL FNDADWGELD YLIVDLPPGT GDIHITITQS FPIAGAVIVT
TPQQVALADT RKGLAMFKMP SINIPVLGVV ENMAYFTPAE LPENKYYIFG KDGGKELAKS
FGVPFLGEIP IVQSITEGGD SGVPVAMDTH NSVARSFAEI AGKVAQQIAI NNAQSAGNVS
PVVEIDTN