Gene Phep_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0041 
Symbol 
ID8251125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp42079 
End bp43305 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content46% 
IMG OID644933690 
ProductGlu/Leu/Phe/Val dehydrogenase 
Protein accessionYP_003090329 
Protein GI255529957 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.452474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.10461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC TGTTAAAAAA ATTCGAAGAG AAGCGGCCGG AGATCGTTTT TGAGTGGAAG 
GATAAGGATT CTGAAGCTGA AGGGTGGGTG GTGATCAATT CGCTTCGCGG AGGAGCAGCA
GGTGGAGGGA CCAGGATGCG CAAAGGCCTG GACAAAAGAG AGGTTGAATC TCTGGCAAAA
ACAATGGAAG TAAAATTTAC CGTATCCGGC CCACCGATAG GCGGGGCAAA GTCGGGCATC
AATTTCGATC CTGCAGACCC GAGAAAAAAG GAGGTTCTGG AGCGCTGGTA TAAAGCGGTA
ATGCCCCTGC TAAAAAATTA TTACGGTACG GGCGGCGATT TAAATATTGA TGAGATCCAT
GAGGTGATCC CTATTACTGA AAACTACGGG TTATGGCACC CTCAGGAAGG CGTAATCAAT
GGGCATTATC AGGCAAGGGA AAATGAAAGG ATCCACCAGA TCGGGCAGCT GCGCTACGGG
GTCTCCAAAG TGCTGGAGGA TTTAAATTAT ACGCCAGACA TTAAAAGAAA GTACAAGGTT
GCTGATATGA TCACCGGTTA TGGTGTGGCG GCATCTATCG GCCATTTTTA CAGCATCTGG
GGTGGGAAGT TGTCAGGAAA AAGAGCGGTT ATCCAGGGCT GGGGAAATGT AGCGGCAGCA
GCAGGGTATT ACCTGACACA AAATGGTGTG AAAATTGTTG GGATCATTGA CCGTGTTGGT
GGATTGATCT GTAAGGATGG CTTTACACAG GAAGAGGTCA TTAGCCTGTT TAACAACAGA
ACAGGAAATA CGCTGGTATC GCCCGACCTG ATTCCTTTTG AACTGGCCAG TAAAGAGATC
TGGGATATTG GCGCCGAGAT ATTTGTTCCC GCTGCAGCTT CCAGACTTGT TCAGCAAAAC
GAAGTGGATC AGTTGATACA TGGGGGGCTC GAAGTGATTG CCTGTGGTGC AAATGTTCCT
TTTGCGGATA AAGAGATTTT CTTTGGGAGC ATTATGGAGC ATGCAGATAA GCACGTTGCA
GTGATACCGG ATTTTATATC AAATTGTGGT ATGGCCAGGG TTTTTGCTTA CCTGATGCAG
AGAAATGTAG AAATGAGTGA CGATGCGATA TTTACGGACG CGTCACAGGT GATTTATAAG
GCACTGAAAG CGGTTCATGA GGAATCTCGG GAAAAGAAGG AACTCTCTAA AACGGCATTT
GAGATTGCGC TTAAACAATT AGTATAA
 
Protein sequence
MKELLKKFEE KRPEIVFEWK DKDSEAEGWV VINSLRGGAA GGGTRMRKGL DKREVESLAK 
TMEVKFTVSG PPIGGAKSGI NFDPADPRKK EVLERWYKAV MPLLKNYYGT GGDLNIDEIH
EVIPITENYG LWHPQEGVIN GHYQARENER IHQIGQLRYG VSKVLEDLNY TPDIKRKYKV
ADMITGYGVA ASIGHFYSIW GGKLSGKRAV IQGWGNVAAA AGYYLTQNGV KIVGIIDRVG
GLICKDGFTQ EEVISLFNNR TGNTLVSPDL IPFELASKEI WDIGAEIFVP AAASRLVQQN
EVDQLIHGGL EVIACGANVP FADKEIFFGS IMEHADKHVA VIPDFISNCG MARVFAYLMQ
RNVEMSDDAI FTDASQVIYK ALKAVHEESR EKKELSKTAF EIALKQLV