Gene Phep_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0034 
Symbol 
ID8251118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp38246 
End bp38569 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content46% 
IMG OID644933683 
Productprotein of unknown function DUF74 
Protein accessionYP_003090322 
Protein GI255529950 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.347076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.179218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAATCA CAACCACCAA CTCTATAGAA GGCAAAAAAG TAGTTAAATA CATCGGCCTT 
GTAAGCGGCG AGACCATTAT TGGCGCCAAC ATTTTTAAAG ATATTTTTGC TGGCATCCGT
GATATTGTTG GCGGCAGGTC AGGCTCTTAC GAACAGGTTC TCCGCGAAGG TAAAAATACC
GCTGTAAACG AGATGCAGCA ATATGCAGCG GCAATGGGTG CCAATGCAAT TATCGGGGTC
GATCTGGACT ATGAAACCGT TGGCAGCGGC GGCAGCATGC TCATGGTTGC TGCAACAGGT
ACTGCTGTGA TTATAGAAGA ATAA
 
Protein sequence
MLITTTNSIE GKKVVKYIGL VSGETIIGAN IFKDIFAGIR DIVGGRSGSY EQVLREGKNT 
AVNEMQQYAA AMGANAIIGV DLDYETVGSG GSMLMVAATG TAVIIEE