| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0033 |
|---|
| Symbol | |
|---|
| ID | 8251117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 37232 |
|---|
| End bp | 38215 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644933682 |
|---|
| Product | 6-phosphofructokinase |
|---|
| Protein accession | YP_003090321 |
|---|
| Protein GI | 255529949 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | [TIGR02482] 6-phosphofructokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.421619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.208975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA TTAAAAATAT AGGAGTATTA ACTTCCGGCG GTGACGCCCC GGGAATGAAT
GCTGCCATTA GGGCAGTTGT TAGAGCGGCA ATTTACTATG ATTTGGAAGT TACAGGTATT
TTAAGGGGTT ATGAAGGCTT GGTTCATGGC GATTTTATCG AAATGAACAG AAAATCGGTA
GCGAATATCA TTCAACGGGG CGGAACTATT TTAAAAACTG CCCGTAGTGA AACGTTCAAG
ACCGCGGAAG GTCGTGAAAT GGGATACCAG CAATTAAAAA AACACCATAT AGATGCCCTG
ATCGTGATTG GTGGTGACGG GACTTTTACC GGGGCAAATT TATTTACGAA TGAGTTTGAT
TTTCCGATAG TGGGCCTTCC GGGTACCATA GATAATGATT TACAGGGAAC AGATTTTACG
ATTGGATATG ATACGGCCAT TAATACAGTC GTAAATGCGG TTGACAAAAT AAGGGATACT
GCTGAATCGC ATGACAGGCT GTTCATTGTA GAGGTGATGG GCCGGGATTC GGGACTGATT
GCTTTGAGAA GCGGTATAGG AGTGGGCGCT GAAGCGATCC TTATCCCGGA AGCGAACATG
GGTGTGGAAG GCCTGATCCA GCGCCTGGAG AACGGGCGTA AAGACAAGGC CTCAAAAATT
GTGATCGTTG CTGAAGGTGA TGAAGTTGGC GGGGCTTTTA ATGTTGGAGA AGCACTCAAA
CAAAAATTCC CGAACTACGA CATCAGAGTC TCGGTACTGG GACATATACA GCGTGGTGGG
AAACCAAGCT GTATGGACCG GGTTCTGGCA AGCAGGTTTG GCGTGGCCGC CGTTGAGGGG
GTTTTGGCCG GACAGTCGGG CGTAATGGTT GGACAGGTAA ACCGGGAGCT CATTTTTACC
CCATTTGATC ATGCCATAAA ACATATTGAT GCACAGCAGG TTAGTCCGGC CTGGTTAAAA
CTAGTAGAAA TTTTATCTTT ATAA
|
|---|
| Protein sequence | MNKIKNIGVL TSGGDAPGMN AAIRAVVRAA IYYDLEVTGI LRGYEGLVHG DFIEMNRKSV
ANIIQRGGTI LKTARSETFK TAEGREMGYQ QLKKHHIDAL IVIGGDGTFT GANLFTNEFD
FPIVGLPGTI DNDLQGTDFT IGYDTAINTV VNAVDKIRDT AESHDRLFIV EVMGRDSGLI
ALRSGIGVGA EAILIPEANM GVEGLIQRLE NGRKDKASKI VIVAEGDEVG GAFNVGEALK
QKFPNYDIRV SVLGHIQRGG KPSCMDRVLA SRFGVAAVEG VLAGQSGVMV GQVNRELIFT
PFDHAIKHID AQQVSPAWLK LVEILSL
|
|---|
| |