| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0030 |
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| Symbol | |
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| ID | 8251114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 33864 |
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| End bp | 35954 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933679 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_003090318 |
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| Protein GI | 255529946 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.876867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.384468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGA ACCCAAATAC AAAACCCAAA TTGATAAAGA GAATTCCAAA TATTCCCAAG
AAACCTCAAA AAGGTTCAAA GTTTAACATA TTTTGGGTTT ATGCTGCTAT TATTTTAGGC
CTTATTTTAT TACAGTTCCT GTTTAGTGCC GACGCGACCA AAACAGTCTC TTACCGTACC
TTTGAAACCC AGATGCTCTT ACCTGGTGAT GTAGAGAAAC TGATCGCCTA CAAACATGAA
GATGTGGTTA AAGTAGAAGT TTTTATTAAA AAGGACAGGC TAAAAGAAGC AAAATATAAA
CAGTATATCA GCAGAAACAA CTTTGGTGCC AGCGACGGCC CTACCGTCTA CTTTAATGCA
GGCTCAATGG ACAGGCTGGA CACTGATCTG AAGGAGTCCC AAAAGAACAT TCCTGAAGAT
CAGCAGATCC TTGCCGAAAA ACAGACCAGA CAAAGTACCT TTAACTCCTG GTTCTTTACC
ATTATCCTCC CTGTATTATT GTTCATCGCC TTCTGGATCT TTATCATGCG CCGCATGGGC
GGTGGTGCCG GTGGTGGGGG CGGTCAGATC TTTAATATCG GAAAATCCAA GGCGACCCTC
TTTGATAAAG AAAGCCAGGT AAATGTTACT TTTAATGATG TAGCCGGCCT TGAAGAAGCC
AAACAGGAAG TAATGGAAAT CGTAGATTTC CTTAAAAACC CCAAAAAATA CACCAATCTT
GGCGGTAAAA TCCCTAAAGG GGCGCTGTTG GTAGGCTCAC CGGGTACCGG TAAGACCTTA
CTGGCCAAAG CTGTAGCCGG AGAAGCCCAG GTGCCTTTCT TCTCCCTTTC AGGGTCAGAC
TTTGTAGAAA TGTTTGTCGG TGTAGGCGCT TCCCGTGTAC GCGACCTGTT TAAACAGGCG
AAAGATAAAG CCCCTTGTAT CATCTTTATT GATGAGGTAG ATGCCATTGG CCGTGCCCGT
GGTAAAAACA GTATGATGGG CGGAAACGAT GAACGTGAAA ATACGCTTAA CCAGTTGCTG
GTTGAAATGG ATGGCTTTGG TACAGATTCG GGAATCATTA TCCTTGCCGC TACCAATCGT
CCTGACGTAC TGGACTCAGC CTTACTGAGA CCCGGACGTT TTGACAGGCA GATCTCTATC
GATAAGCCAG ATTTGGTGGG CCGTGAACAG ATCTTTAAAG TTCACCTGAA ACCCATCAAA
ACCGATGAAA TTGTAGATGC CAAAAAGCTT TCTGCACAAA CCCCTGGTTT TGCAGGAGCT
GAAATTGCCA ATGTGTGTAA TGAGGCCGCA TTAATTGCCG CCCGACGCAA TAAGGAGTTT
GTAGATATGC AGGACTTTCA GGACGCGATA GACCGTGTTA TTGGTGGTTT AGAAAAGAAA
AACAAAATCA TCTCTCCTGA AGAAAAACGC ATCGTTGCTT ACCACGAAGC TGGTCATGCC
ATTGCGGGCT GGTTCCTTGA ACATGCCGAT CCTCTGGTAA AAGTATCTAT CGTTCCCCGT
GGGGTAGCAG CTTTAGGCTA TGCGCAATAC CTGCCTAAAG AACAGTTCCT GTATACTACA
GAGCAGTTAA CCGATGGCAT GTGTATGACC ATGGGTGGCC GCGTCGCAGA AGACATTGTT
TTCGGAAAAA TCTCTACCGG TGCACAGAAC GATCTGGAAC GCATTACTAA ATTGGCTTAC
GCCATGGTTA CCATTTATGG TATGAACAGC ACTATTGGAA ATGTTTCTTT CCACGATCCT
CAGAATGAAT ACAACTTCAA TAAACCTTAT TCTGAAAAAA CATCGGAAAT GATCGACAAT
GAAGTACGTA TCCTGATCTC GGAAGTTTAT ACCAGAACAA AGTCCTTGTT AACAGATAAA
AGGGAAGGTC TTGAAAAACT GGCCCAAAAG CTGATAGAGA AAGAGATCCT TTTCCAGGCA
GATTTAGAAG AGATCCTGGG CAAACGCCCT TTCGACAACC GCACCACTTA TGATGAGTTT
GTAAATGGCA CAGGTGACCA GAAACCGGCA GCCGAAGGAT TGCTGCACGA TGGCGTTAGC
CAGCCCGCAG ATCCTGCAAC GCCTATAACC CCGGCTAAAA CAGAGTCTTA A
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| Protein sequence | MKENPNTKPK LIKRIPNIPK KPQKGSKFNI FWVYAAIILG LILLQFLFSA DATKTVSYRT
FETQMLLPGD VEKLIAYKHE DVVKVEVFIK KDRLKEAKYK QYISRNNFGA SDGPTVYFNA
GSMDRLDTDL KESQKNIPED QQILAEKQTR QSTFNSWFFT IILPVLLFIA FWIFIMRRMG
GGAGGGGGQI FNIGKSKATL FDKESQVNVT FNDVAGLEEA KQEVMEIVDF LKNPKKYTNL
GGKIPKGALL VGSPGTGKTL LAKAVAGEAQ VPFFSLSGSD FVEMFVGVGA SRVRDLFKQA
KDKAPCIIFI DEVDAIGRAR GKNSMMGGND ERENTLNQLL VEMDGFGTDS GIIILAATNR
PDVLDSALLR PGRFDRQISI DKPDLVGREQ IFKVHLKPIK TDEIVDAKKL SAQTPGFAGA
EIANVCNEAA LIAARRNKEF VDMQDFQDAI DRVIGGLEKK NKIISPEEKR IVAYHEAGHA
IAGWFLEHAD PLVKVSIVPR GVAALGYAQY LPKEQFLYTT EQLTDGMCMT MGGRVAEDIV
FGKISTGAQN DLERITKLAY AMVTIYGMNS TIGNVSFHDP QNEYNFNKPY SEKTSEMIDN
EVRILISEVY TRTKSLLTDK REGLEKLAQK LIEKEILFQA DLEEILGKRP FDNRTTYDEF
VNGTGDQKPA AEGLLHDGVS QPADPATPIT PAKTES
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