| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0028 |
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| Symbol | |
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| ID | 8251112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 32026 |
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| End bp | 33108 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933677 |
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| Product | Beta-ketoacyl-acyl-carrier-protein synthase I |
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| Protein accession | YP_003090316 |
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| Protein GI | 255529944 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.895405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.419548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCATTA AATCAACAAT ACACTCGGTT ATTACTGGCA CGGGAAGTTA TATCCCCGAA
AATGTTATCT CAGGAAATGC CTTTTTAAAC GCATCCTTTT ACGAAAATGG GGTAAAGCTG
GATAAGGACA TCAATGAGAT CATCAGCAAA TTCTCAGAAA TTACCGAGAT CAACGAGCGC
CGATATATTG ATGTCAATCT GGTGAGCAGT AATATTGCTG CCATTGCTGC ACAAAGGGCC
ATCGACAGCG CAAAAATCGA TAAGGAAAGC CTTGACCACA TTATTTTTTG CCACAACTTC
GGGGATGTAA AAGCAGGCAG CAACCGCATG GACATCCTGC CTTCGCTTGC CGCTAAAGTA
AAACAGACCC TGCAGATTAA AAATCCGGAC TGTGTGGCTT ATGATATCAT CTTTGGTTGC
CCAGGTTGGG TACAGGGAGC CATCCAGGCC AATTATCTGA TCCAAAGTGG TGATGCCGGC
CGGGTAATGG TCATAGGCGC AGAAACATTG TCCCGGATTA TTGACCCGCA CGACCGCGAC
AGCATGATCT TCTCTGATGG GGCAGCCGCA GTTATATTTG AAGCCCAAAA CAGTGAAGAA
GCCCTTGGTA TCATCGCTCA TAAAACACAG ACCTATGCGG TTGATTACGG TTCATTGCTG
GTCATGGGGA AAAGCAATAA TCCGGATGAA TGCAATGGCA ATGCTTACCT TAAAATGAAT
GGCCGTAAGC TTTATGAATT TGCCGTAACT ACCGTACCAC AGGTTGTGAA AACTGCAATA
GATAAAGCCG GAATCAGCAT TACCGATATT AAAACAGTCT TCATCCACCA GGCCAATGGA
AAAATGGACA ATGCCATCAT GAAGCGGCTT TTTAAACTTT ACGGACAGGA TACTGTTCCC
GAAAACCTTG TGCCTATGAC CATTTCATGG TTAGGGAACA GTTCGGTAGC TACCATTCCA
ACGCTGTTAG ACCTGGTCAT GAAAAACAAA GTAAAAGGTT ACCAGGTCAG AAAGGGAGAA
TATGCCGTTT TTACCTCTGT TGGGGCAGGG ATGCACATCA ATGCTTTTGT CTATCGCTTT
TAA
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| Protein sequence | MGIKSTIHSV ITGTGSYIPE NVISGNAFLN ASFYENGVKL DKDINEIISK FSEITEINER
RYIDVNLVSS NIAAIAAQRA IDSAKIDKES LDHIIFCHNF GDVKAGSNRM DILPSLAAKV
KQTLQIKNPD CVAYDIIFGC PGWVQGAIQA NYLIQSGDAG RVMVIGAETL SRIIDPHDRD
SMIFSDGAAA VIFEAQNSEE ALGIIAHKTQ TYAVDYGSLL VMGKSNNPDE CNGNAYLKMN
GRKLYEFAVT TVPQVVKTAI DKAGISITDI KTVFIHQANG KMDNAIMKRL FKLYGQDTVP
ENLVPMTISW LGNSSVATIP TLLDLVMKNK VKGYQVRKGE YAVFTSVGAG MHINAFVYRF
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