| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0027 |
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| Symbol | |
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| ID | 8251111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 30536 |
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| End bp | 32029 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644933676 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003090315 |
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| Protein GI | 255529943 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.447048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAAGA TCAGTTTAGC GAATAAATTT TTTTTAGCCC TCAGCCTGTT GTTTTTACCC
GGACCTTTAT TTGCCAAATT TGATTTTAAT GCAAACTGTC TAAAGGCTTA TCAGCTGATT
TTTGAGCTTA AACTGAACCC GGCAAGACAA ATGGTCGCTT CAGAGAAGAA AGCTAATCCT
AACAATGCTA TTGTGCCTTT ACTGGAAAAT TACATCGATT TCTTTTATTT GCTGACAACA
GACAGTAAGG ATGATTTTAA CCGTTTGAAA GGCAATAAAG GGAGCCGGCT GGACCAGATT
GCAGATGATG ACAGCAATTC TCCGTATTAT TTATATGCAC AGGCAGAGAT CAATTTACAA
TGGGCGCTCA TTCGTGGGCG TTTTGGCGAA CAGTTTAATG CTGCGCTGGA AATTAAAAAA
GCCAACAGCT ACCTGCAGGA GAACGCGAAG AAGTTTCCCG GCTTCCATTT AAATTTAAAA
GGGATAGGCC TGATCAATGC CGTCCTGGGC AGCCTGCCGG ATGGTTTCAT GAAGAAAACA
CTATCCACCT TTGGAATCAA GGGAAATGTA AAAACCGGCC TGGCCATGAT GCAGAAGCTG
GCAGAGGGCT TACCTAAATC TACCTACGAG CCATTTTATG AAGAGGCTGT ATTTTATTAT
TCATTTGTAC TGGTAGATGT AGCCCATGCG GAAAATGCCT ATGCCGAAAC CATGAAATAT
GCGGCCAGGG TTTCGGACAA CAGTTTGTTA AAATCCTACC TTAAAGCTTA TGTAAGTGCC
AAAAGAGGGC ATAATGAGGA AGCGATTGGC GTTCTTGCCG AAAGGCCTTC CGGGGGACAG
TACCAGGCTT TTCCATACCT GGATTACCTG ATGGGGATTG CAAGGCTGAA TAAGCTTGAT
TTTAGTGCTG CAGCTTATTT CAATAAATTT TTGCAGAGCA ATAAAGGGGT AAGCTATGTA
AAGGACAGCT ACCTGCATTT GGGATGGATC GAATTGATCT CGGGCGATAT AAAGGGGTAT
CAGGCTTATG CTGAAAAAGT TAAAGGTATG GGCTATGCGA TTAACGAACG CGACAAGCAG
GCGCTGAACG AAGTGGCTTC AGGAAGTCCG AATGTTGGTC TTTTAAAAGC CAGGTTGTTA
TTTGACGGAG GCTATTACAG CAAATCGTTG GAAATATTGG GAGGAATAAA GGAGGGCGAC
CTGAGCCTGG TAAAAGACCG GACGGAATAC CATTACCGGC TGGGAAGGAA CAATGATGAA
CTGGGAAAAT GGGATGCTGC ACTGGAGCAT TACCAGCAGG CAGTAAATTA TGGAAAAAGC
CTGAAGGCGT ATTTTGCGGC CAATTCAGCT TTGTGCATGG GAAAGATCTA TATGAAGAAA
AAGGCCTATA CGCAGGCCAA GGCCAGCTTT AATACCGCGA TAAACATGAA AGACCATCAA
TATGAAAACA GTATTGAAAG TGAAGCAAGG GACAGCTTAA GAAGGATCAA TTAA
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| Protein sequence | MHKISLANKF FLALSLLFLP GPLFAKFDFN ANCLKAYQLI FELKLNPARQ MVASEKKANP
NNAIVPLLEN YIDFFYLLTT DSKDDFNRLK GNKGSRLDQI ADDDSNSPYY LYAQAEINLQ
WALIRGRFGE QFNAALEIKK ANSYLQENAK KFPGFHLNLK GIGLINAVLG SLPDGFMKKT
LSTFGIKGNV KTGLAMMQKL AEGLPKSTYE PFYEEAVFYY SFVLVDVAHA ENAYAETMKY
AARVSDNSLL KSYLKAYVSA KRGHNEEAIG VLAERPSGGQ YQAFPYLDYL MGIARLNKLD
FSAAAYFNKF LQSNKGVSYV KDSYLHLGWI ELISGDIKGY QAYAEKVKGM GYAINERDKQ
ALNEVASGSP NVGLLKARLL FDGGYYSKSL EILGGIKEGD LSLVKDRTEY HYRLGRNNDE
LGKWDAALEH YQQAVNYGKS LKAYFAANSA LCMGKIYMKK KAYTQAKASF NTAINMKDHQ
YENSIESEAR DSLRRIN
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