Gene Phep_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0024 
Symbol 
ID8251108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp28234 
End bp28593 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content40% 
IMG OID644933673 
ProductTM2 domain containing protein 
Protein accessionYP_003090312 
Protein GI255529940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.506718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATT CACCATTTAT GTCGCTACCA GGCATTACGC CACAGGAATA TTCGTACTTG 
CAAAGTGCAA CTACCGGATT TAGCGAGCAA CAGTTAAGGG GCTTTTTAAT GATTTATGGA
GGTAAAAGAA GGAACCCTGA TGATATGGTG CTGTACTGTA TCCTTGGTTT TTTTGTACCG
GGACTGCCCA GGTTTTTAGT GAACCAGATT GGTATGGGTA TTTTGTATTT CTTTACAATC
GGTTTGTGCT TTATAGGCAC GATCATCGAC CTGATCAACC ATAAAAGCCT TGCTTATGAA
TACAACCAGC GGATGGTGTT TGAAAGTCTG CAAATGGTAA AAATGGGTAA TTTACAGTAA
 
Protein sequence
MFDSPFMSLP GITPQEYSYL QSATTGFSEQ QLRGFLMIYG GKRRNPDDMV LYCILGFFVP 
GLPRFLVNQI GMGILYFFTI GLCFIGTIID LINHKSLAYE YNQRMVFESL QMVKMGNLQ