Gene Phep_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0020 
Symbol 
ID8251104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp23251 
End bp24060 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content38% 
IMG OID644933669 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_003090308 
Protein GI255529936 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAA GAGCAATAAC TGCTTTCTTT TTTACCATTG TAATGTTAGG TTCTATATTT 
TTAGGGGCCT ATACCTTTAC TTTTTTTTAC CTCATTTTAA GTCTTGCCGC TTTATTTGAA
TTCTTTGGTA TGATTAAGAC TGCAGGCATC CGTCCGCACA GAAATATTGC GCTGGTTGCA
GCAGCACTTA TTTTTTTGAT GACGGCAGGC TATCACTTAC TACAATTTGA AACTAAGTTC
ATGCTGCTCA TTGTACCCTT AATTTTCTCG GTATTCATCA GTGAGCTGTA TAAAAAGGAA
AAAATACCTT TTTCTAATAT TTCCTACACA TTTGTAGGGT TTATCTACGT TACAGCACCC
TTTTGTTTCT TTTATTCCTT AGGTTTTATA CAGGAAACAG CCACTTATAA TTTTCATTTA
CCACTGGCTT TTTTATTGAT GTTATGGGCC AGTGATACTG GAGCGTATCT GTTTGGGATG
AAATTCGGAA AAACACGTTT GTTTGAACGC CATTCGCCTA AAAAATCATG GGAAGGCTTT
TTTGGTGGTG TCTTTACCAG TGTACTGGTG GCTTATTTAA TTTCTTTATG CTTTACGGAG
ATCAGTCCAT TCATATTTGG TGGAATGGCG GTCTTGATCG TCTGTTTCGG TACACTTGGA
GATCTTGTCG AATCCATGCT TAAACGAAGT TTAAATGTAA AGGATTCCGG TAATATACTG
CCAGGCCACG GAGGTTTTTT AGATCGCTTT GACGGACTTT TAATTGCTGC GCCGGTAGTT
TATGCTTATC TGTACCTGAT ACTGAATTAA
 
Protein sequence
MKTRAITAFF FTIVMLGSIF LGAYTFTFFY LILSLAALFE FFGMIKTAGI RPHRNIALVA 
AALIFLMTAG YHLLQFETKF MLLIVPLIFS VFISELYKKE KIPFSNISYT FVGFIYVTAP
FCFFYSLGFI QETATYNFHL PLAFLLMLWA SDTGAYLFGM KFGKTRLFER HSPKKSWEGF
FGGVFTSVLV AYLISLCFTE ISPFIFGGMA VLIVCFGTLG DLVESMLKRS LNVKDSGNIL
PGHGGFLDRF DGLLIAAPVV YAYLYLILN