Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0020 |
Symbol | |
ID | 8251104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 23251 |
End bp | 24060 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644933669 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_003090308 |
Protein GI | 255529936 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACAA GAGCAATAAC TGCTTTCTTT TTTACCATTG TAATGTTAGG TTCTATATTT TTAGGGGCCT ATACCTTTAC TTTTTTTTAC CTCATTTTAA GTCTTGCCGC TTTATTTGAA TTCTTTGGTA TGATTAAGAC TGCAGGCATC CGTCCGCACA GAAATATTGC GCTGGTTGCA GCAGCACTTA TTTTTTTGAT GACGGCAGGC TATCACTTAC TACAATTTGA AACTAAGTTC ATGCTGCTCA TTGTACCCTT AATTTTCTCG GTATTCATCA GTGAGCTGTA TAAAAAGGAA AAAATACCTT TTTCTAATAT TTCCTACACA TTTGTAGGGT TTATCTACGT TACAGCACCC TTTTGTTTCT TTTATTCCTT AGGTTTTATA CAGGAAACAG CCACTTATAA TTTTCATTTA CCACTGGCTT TTTTATTGAT GTTATGGGCC AGTGATACTG GAGCGTATCT GTTTGGGATG AAATTCGGAA AAACACGTTT GTTTGAACGC CATTCGCCTA AAAAATCATG GGAAGGCTTT TTTGGTGGTG TCTTTACCAG TGTACTGGTG GCTTATTTAA TTTCTTTATG CTTTACGGAG ATCAGTCCAT TCATATTTGG TGGAATGGCG GTCTTGATCG TCTGTTTCGG TACACTTGGA GATCTTGTCG AATCCATGCT TAAACGAAGT TTAAATGTAA AGGATTCCGG TAATATACTG CCAGGCCACG GAGGTTTTTT AGATCGCTTT GACGGACTTT TAATTGCTGC GCCGGTAGTT TATGCTTATC TGTACCTGAT ACTGAATTAA
|
Protein sequence | MKTRAITAFF FTIVMLGSIF LGAYTFTFFY LILSLAALFE FFGMIKTAGI RPHRNIALVA AALIFLMTAG YHLLQFETKF MLLIVPLIFS VFISELYKKE KIPFSNISYT FVGFIYVTAP FCFFYSLGFI QETATYNFHL PLAFLLMLWA SDTGAYLFGM KFGKTRLFER HSPKKSWEGF FGGVFTSVLV AYLISLCFTE ISPFIFGGMA VLIVCFGTLG DLVESMLKRS LNVKDSGNIL PGHGGFLDRF DGLLIAAPVV YAYLYLILN
|
| |